RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 KCNK16Q96T55 309 aa17.31■□□□□ 0.36
PCNX4-213ENST00000556907 HCFC1R1Q9NWW0 138 aa17.31■□□□□ 0.36
PCNX4-213ENST00000556907 GDE1Q9NZC3 331 aa17.31■□□□□ 0.36
PCNX4-213ENST00000556907 IL37Q9NZH6 218 aa17.31■□□□□ 0.36
PCNX4-213ENST00000556907 PPP2R2CQ9Y2T4 447 aa17.31■□□□□ 0.36
PCNX4-213ENST00000556907 REXO2Q9Y3B8 237 aaKnown RBP17.31■□□□□ 0.36
PCNX4-213ENST00000556907 XIRP2A4UGR9 3374 aa17.31■□□□□ 0.36
PCNX4-213ENST00000556907 ZNF638Q14966 1978 aaKnown RBP17.31■□□□□ 0.36
PCNX4-213ENST00000556907 DENND4AQ7Z401 1863 aa17.31■□□□□ 0.36
PCNX4-213ENST00000556907 SPTBN5Q9NRC6 3674 aaKnown RBP17.31■□□□□ 0.36
PCNX4-213ENST00000556907 NCANO14594 1321 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 A0A087X0T9 212 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 ESPNB1AK53 854 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 TNFRSF10BO14763 440 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 THAP12O43422 761 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 FAM228BP0C875 321 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 CHRNB2P17787 502 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 PFKLP17858 780 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 DDX6P26196 483 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCNX4-213ENST00000556907 YWHAQP27348 245 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 CACNA2D1P54289 1103 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 KRT83P78385 493 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 PKDCCQ504Y2 493 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 ARHGAP15Q53QZ3 475 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 TRIM72Q6ZMU5 477 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 CCAR2Q8N163 923 aaKnown RBP17.3■□□□□ 0.36
PCNX4-213ENST00000556907 STK32AQ8WU08 396 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 TFAP2BQ92481 460 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 HSFY1Q96LI6 401 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 SLITRK1Q96PX8 696 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 ACP6Q9NPH0 428 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 TMEM30AQ9NV96 361 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 CDH7Q9ULB5 785 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 PCDHGC3Q9UN70 934 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 NOTCH4Q99466 2003 aa17.3■□□□□ 0.36
PCNX4-213ENST00000556907 FAM92AA1XBS5 289 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 ZSCAN12O43309 604 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 BEST1O76090 585 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 F11P03951 625 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 MMEP08473 750 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 MYL4P12829 197 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 TNFAIP3P21580 790 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 BRD2P25440 801 aaKnown RBP17.29■□□□□ 0.36
PCNX4-213ENST00000556907 GABRR2P28476 465 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 PLA2G4AP47712 749 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 CDR1P51861 262 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 SLC5A3P53794 718 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 NTHL1P78549 312 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 GFPT1Q06210 699 aaPredicted RBP17.29■□□□□ 0.36
PCNX4-213ENST00000556907 SPA17Q15506 151 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 C10orf76Q5T2E6 689 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 SDHAF4Q5VUM1 108 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 ZNF662Q6ZS27 426 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 TTC30AQ86WT1 665 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 ZDHHC14Q8IZN3 488 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 HS6ST3Q8IZP7 471 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 TDRD5Q8NAT2 981 aaKnown RBP17.29■□□□□ 0.36
PCNX4-213ENST00000556907 GPR152Q8TDT2 470 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 KCTD13Q8WZ19 329 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 NXPE3Q969Y0 559 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.29■□□□□ 0.36
PCNX4-213ENST00000556907 LHX5Q9H2C1 402 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 IL21Q9HBE4 155 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 LUC7LQ9NQ29 371 aaKnown RBP17.29■□□□□ 0.36
PCNX4-213ENST00000556907 CYLDQ9NQC7 956 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 EPS15L1Q9UBC2 864 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 ADAMTS1Q9UHI8 967 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 NAGPAQ9UK23 515 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 MAGED2Q9UNF1 606 aaPredicted RBP17.29■□□□□ 0.36
PCNX4-213ENST00000556907 CEP83Q9Y592 693 aa17.29■□□□□ 0.36
PCNX4-213ENST00000556907 DOCK6Q96HP0 2047 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 GOLGA6L9A6NEM1 432 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 LOC730098B7Z3J9 87 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 HHLA1C9JL84 531 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 M0QYV0 167 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 WEE1P30291 646 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 VAV2P52735 878 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 SNX16P57768 344 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 PDE4CQ08493 712 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 TAF3Q5VWG9 929 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 GAREM2Q75VX8 874 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 PIGZQ86VD9 579 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 TXLNBQ8N3L3 684 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 SLC35F5Q8WV83 523 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 MRPS31Q92665 395 aaKnown RBP17.28■□□□□ 0.36
PCNX4-213ENST00000556907 PPP1R13BQ96KQ4 1090 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 ZSWIM1Q9BR11 485 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 ATXN3LQ9H3M9 355 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 ZNF334Q9HCZ1 680 aaPredicted RBP17.28■□□□□ 0.36
PCNX4-213ENST00000556907 TRPM5Q9NZQ8 1165 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 CDH22Q9UJ99 828 aa17.28■□□□□ 0.36
PCNX4-213ENST00000556907 CALCAP01258 141 aa17.27■□□□□ 0.36
PCNX4-213ENST00000556907 CYP1A1P04798 512 aaPredicted RBP17.27■□□□□ 0.36
PCNX4-213ENST00000556907 GZMAP12544 262 aa17.27■□□□□ 0.36
PCNX4-213ENST00000556907 LAMP2P13473 410 aa17.27■□□□□ 0.36
PCNX4-213ENST00000556907 GBP2P32456 591 aaPredicted RBP17.27■□□□□ 0.36
PCNX4-213ENST00000556907 GPD2P43304 727 aa17.27■□□□□ 0.36
PCNX4-213ENST00000556907 ACADSBP45954 432 aa17.27■□□□□ 0.36
PCNX4-213ENST00000556907 PSEN1P49768 467 aa17.27■□□□□ 0.36
PCNX4-213ENST00000556907 ZP2Q05996 745 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms