RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PDE1AP54750 535 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 AK2P54819 239 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 SOX10P56693 466 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 EEFSECP57772 596 aaKnown RBP5.5□□□□□ -1.53
SCFD1-221ENST00000556534 TIRAPP58753 221 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 NANOS3P60323 173 aaKnown RBP5.5□□□□□ -1.53
SCFD1-221ENST00000556534 STK3Q13188 491 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 FAM153CQ494X1 144 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 MANEALQ5VSG8 457 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 CATSPERGQ6ZRH7 1159 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 NOL8Q76FK4 1167 aaKnown RBP5.5□□□□□ -1.53
SCFD1-221ENST00000556534 KRT28Q7Z3Y7 464 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 RD3Q7Z3Z2 195 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 DPP9Q86TI2 863 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 FANCBQ8NB91 859 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 SVIPQ8NHG7 77 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 REPS1Q96D71 796 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 ZNF668Q96K58 619 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-221ENST00000556534 ZBTB45Q96K62 511 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-221ENST00000556534 THAP7Q9BT49 309 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-221ENST00000556534 HEYLQ9NQ87 328 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-221ENST00000556534 FNIP2Q9P278 1114 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 ADAMTS5Q9UNA0 930 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 COL11A2P13942 1736 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-221ENST00000556534 CCDC194A0A1B0GVG4 234 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 AREL1O15033 823 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 PRKCBP05771 671 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 MYL4P12829 197 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 MTHFSP49914 203 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 ELLP55199 621 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-221ENST00000556534 PROK1P58294 105 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 E2F1Q01094 437 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 SLC35G1Q2M3R5 365 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 HIBCHQ6NVY1 386 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-221ENST00000556534 PARS2Q7L3T8 475 aaKnown RBP5.49□□□□□ -1.53
SCFD1-221ENST00000556534 ZNF804AQ7Z570 1209 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 LRRC46Q96FV0 321 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 WDYHV1Q96HA8 205 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 LENG8Q96PV6 779 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-221ENST00000556534 GDF15Q99988 308 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 INO80BQ9C086 356 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-221ENST00000556534 DNAJB11Q9UBS4 358 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 SERGEFQ9UGK8 458 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 HPSEQ9Y251 543 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 COX11Q9Y6N1 276 aa5.49□□□□□ -1.53
SCFD1-221ENST00000556534 SPATA31A6Q5VVP1 1343 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 ARHGEF17Q96PE2 2063 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-221ENST00000556534 QSOX1O00391 747 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 KCNQ3O43525 872 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 PLIN1O60240 522 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 PROP1O75360 226 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 HNRNPCP07910 306 aaKnown RBP eCLIP5.48□□□□□ -1.53
SCFD1-221ENST00000556534 NPSP0C0P6 89 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 HARSP12081 509 aaKnown RBP5.48□□□□□ -1.53
SCFD1-221ENST00000556534 NTSR1P30989 418 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 GKP32189 559 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 CYP4F2P78329 520 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 FAM209BQ5JX69 171 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 MZT2AQ6P582 158 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 USP49Q70CQ1 688 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 BEND5Q7L4P6 421 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 DNAJC10Q8IXB1 793 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 CTHRC1Q96CG8 243 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 ZDHHC12Q96GR4 267 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 SGCZQ96LD1 299 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 MACROD1Q9BQ69 325 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 ZNF700Q9H0M5 742 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 TRIM36Q9NQ86 728 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 USP22Q9UPT9 525 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 WNT6Q9Y6F9 365 aa5.48□□□□□ -1.53
SCFD1-221ENST00000556534 KAT6AQ92794 2004 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 M0R3H8 397 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 PMPCBO75439 489 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 FGF18O76093 207 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 DLDP09622 509 aaKnown RBP5.47□□□□□ -1.53
SCFD1-221ENST00000556534 FAM163BP0C2L3 166 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 FPR3P25089 353 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 GABRB3P28472 473 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 RBL1P28749 1068 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 HTR7P34969 479 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 GATMP50440 423 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 COPAP53621 1224 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 PSG6Q00889 435 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 NHLH1Q02575 133 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 IZUMO3Q5VZ72 239 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 CEP85Q6P2H3 762 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 CRTC1Q6UUV9 634 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 SLC29A4Q7RTT9 530 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 METTL25Q8N6Q8 603 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 ABHD11Q8NFV4 315 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 ZNF384Q8TF68 577 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 NTN5Q8WTR8 489 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-221ENST00000556534 BRI3BPQ8WY22 251 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 GJA10Q969M2 543 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 FAM227BQ96M60 508 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 CCDC138Q96M89 665 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 MYD88Q99836 296 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 DPCDQ9BVM2 203 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-221ENST00000556534 MAGEB5Q9BZ81 275 aa5.47□□□□□ -1.53
SCFD1-221ENST00000556534 CCNL1Q9UK58 526 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms