RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 CAPS2Q9BXY5 557 aa10.56□□□□□ -0.72
EFCAB11-209ENST00000556005 FOXP3Q9BZS1 431 aa10.56□□□□□ -0.72
EFCAB11-209ENST00000556005 EPB41L4BQ9H329 900 aa10.56□□□□□ -0.72
EFCAB11-209ENST00000556005 NGRNQ9NPE2 291 aaKnown RBP10.56□□□□□ -0.72
EFCAB11-209ENST00000556005 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.56□□□□□ -0.72
EFCAB11-209ENST00000556005 TRMT13Q9NUP7 481 aaKnown RBP10.56□□□□□ -0.72
EFCAB11-209ENST00000556005 MIOSQ9NXC5 875 aa10.56□□□□□ -0.72
EFCAB11-209ENST00000556005 DDX43Q9NXZ2 648 aaKnown RBP10.56□□□□□ -0.72
EFCAB11-209ENST00000556005 DNAH12Q6ZR08 3092 aa10.56□□□□□ -0.72
EFCAB11-209ENST00000556005 SGK1O00141 431 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 GABBR2O75899 941 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 NPR3P17342 541 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 NR1D1P20393 614 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 SCNN1GP51170 649 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 ARSEP51690 589 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 AFF1P51825 1210 aaKnown RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 SKOR1P84550 965 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 KRT81Q14533 505 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 LPIN1Q14693 890 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 UPP1Q16831 310 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 HIBCHQ6NVY1 386 aaPredicted RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 KDM7AQ6ZMT4 941 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 VSIG1Q86XK7 387 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 FUKQ8N0W3 1084 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 SH2D3CQ8N5H7 860 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 ARFGAP2Q8N6H7 521 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 CD99L2Q8TCZ2 262 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 PEBP4Q96S96 227 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 TMEM121Q9BTD3 319 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 BCCIPQ9P287 314 aaKnown RBP eCLIP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 TPX2Q9ULW0 747 aaKnown RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 DNALI1O14645 258 aaPredicted RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 MDM4O15151 490 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 MGEA5O60502 916 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 ATP2C2O75185 946 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 PAX3P23760 479 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 ACAT1P24752 427 aaKnown RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 RDXP35241 583 aaKnown RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 DSC3Q14574 896 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 DNAJC21Q5F1R6 531 aaKnown RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 C6orf118Q5T5N4 469 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 CYP4V2Q6ZWL3 525 aaPredicted RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 PCGF5Q86SE9 256 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 PIGZQ86VD9 579 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 RNF169Q8NCN4 708 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 RSAD2Q8WXG1 361 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 KCTD13Q8WZ19 329 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 CENPIQ92674 756 aaPredicted RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 P3H4Q92791 437 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 ADAM2Q99965 735 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 TSEN34Q9BSV6 310 aaKnown RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 MED10Q9BTT4 135 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 ROPN1BQ9BZX4 212 aaPredicted RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 CDC42EP4Q9H3Q1 356 aaKnown RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 ROPN1Q9HAT0 212 aaPredicted RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 PCDH9Q9HC56 1237 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 AAASQ9NRG9 546 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 CREBZFQ9NS37 354 aa10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 SAE1Q9UBE0 346 aaPredicted RBP10.55□□□□□ -0.72
EFCAB11-209ENST00000556005 CASTOR2A6NHX0 329 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 MCF2LO15068 1137 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 SHOX2O60902 331 aaPredicted RBP10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 IFNB1P01574 187 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 SHBGP04278 402 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 FAM200BP0CF97 657 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 TKTP29401 623 aaKnown RBP10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 STIP1P31948 543 aaKnown RBP10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 ACTN2P35609 894 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 CHKAP35790 457 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 HDAC4P56524 1084 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 GPS1Q13098 491 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 DPYSL3Q14195 570 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 MORF4L2Q15014 288 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 TRIM71Q2Q1W2 868 aaKnown RBP10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 MDH1BQ5I0G3 518 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 ERMARDQ5T6L9 678 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 RELL1Q8IUW5 271 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 ZCCHC9Q8N567 271 aaKnown RBP10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 SPATA18Q8TC71 538 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 CLEC4CQ8WTT0 213 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 PGM2Q96G03 612 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 RNF157Q96PX1 679 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 C11orf84Q9BUA3 381 aaPredicted RBP10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 DDX23Q9BUQ8 820 aaKnown RBP10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 TMEM109Q9BVC6 243 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 OSBPL7Q9BZF2 842 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 LRRC4Q9HBW1 653 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 CDH9Q9ULB4 789 aa10.54□□□□□ -0.72
EFCAB11-209ENST00000556005 ZNF487B1APH4 448 aa10.53□□□□□ -0.72
EFCAB11-209ENST00000556005 TTC4O95801 387 aa10.53□□□□□ -0.72
EFCAB11-209ENST00000556005 POMCP01189 267 aa10.53□□□□□ -0.72
EFCAB11-209ENST00000556005 ZSCAN5DPP0CG00 497 aa10.53□□□□□ -0.72
EFCAB11-209ENST00000556005 ODC1P11926 461 aa10.53□□□□□ -0.72
EFCAB11-209ENST00000556005 ETS1P14921 441 aa10.53□□□□□ -0.72
EFCAB11-209ENST00000556005 PCSK1P29120 753 aa10.53□□□□□ -0.72
EFCAB11-209ENST00000556005 MATKP42679 507 aa10.53□□□□□ -0.72
EFCAB11-209ENST00000556005 EIF3EP60228 445 aaKnown RBP10.53□□□□□ -0.72
EFCAB11-209ENST00000556005 MRPS5P82675 430 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms