RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 WDFY4Q6ZS81 3184 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 KANSL1LA0AUZ9 987 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 M0QYV0 167 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 CYP26A1O43174 497 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 LETM1O95202 739 aaPredicted RBP12.76□□□□□ -0.37
SRP54-206ENST00000555317 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 GLULP15104 373 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
SRP54-206ENST00000555317 AVPR2P30518 371 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 IFNAR2P48551 515 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 TUBP50607 506 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 VCPP55072 806 aaKnown RBP12.76□□□□□ -0.37
SRP54-206ENST00000555317 STARD6P59095 220 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 GOLGA8FQ08AF8 430 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 GOLGA8DPQ0D2H9 430 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 MTF1Q14872 753 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 PDGFRLQ15198 375 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 ARHGAP44Q17R89 818 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 FKBP15Q5T1M5 1219 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 CWF19L1Q69YN2 538 aaKnown RBP12.76□□□□□ -0.37
SRP54-206ENST00000555317 C11orf57Q6ZUT1 292 aaPredicted RBP12.76□□□□□ -0.37
SRP54-206ENST00000555317 GPRIN1Q7Z2K8 1008 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 SIX6OS1Q8N1H7 587 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 UBR7Q8N806 425 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 MSANTD3Q96H12 275 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 SLC22A12Q96S37 553 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 KCNH6Q9H252 994 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 C8orf33Q9H7E9 229 aaPredicted RBP12.76□□□□□ -0.37
SRP54-206ENST00000555317 LRRC4Q9HBW1 653 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 SMPD4Q9NXE4 827 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 IL37Q9NZH6 218 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 NAGPAQ9UK23 515 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 SCML2Q9UQR0 700 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 SIT1Q9Y3P8 196 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 CPQQ9Y646 472 aa12.76□□□□□ -0.37
SRP54-206ENST00000555317 XPO1O14980 1071 aaKnown RBP12.75□□□□□ -0.37
SRP54-206ENST00000555317 NCAM2O15394 837 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 MED7O43513 233 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 OAS1P00973 400 aaKnown RBP12.75□□□□□ -0.37
SRP54-206ENST00000555317 SLC9A1P19634 815 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 PON1P27169 355 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 PSEN1P49768 467 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 KIF11P52732 1056 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 NUBP1P53384 320 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 SLC7A9P82251 487 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 AMPD2Q01433 879 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 USP4Q13107 963 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 ZNF77Q15935 545 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 KLHL40Q2TBA0 621 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 ITPRIPL2Q3MIP1 535 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 PIGZQ86VD9 579 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 ARHGAP18Q8N392 663 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 CPA6Q8N4T0 437 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 PJA1Q8NG27 643 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 TTC8Q8TAM2 541 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 ATP2A3Q93084 1043 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 EXOC4Q96A65 974 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 KREMEN1Q96MU8 473 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 LRRC3BQ96PB8 259 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 CDK5RAP1Q96SZ6 601 aaKnown RBP12.75□□□□□ -0.37
SRP54-206ENST00000555317 NELL2Q99435 816 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 UBXN6Q9BZV1 441 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 FOXQ1Q9C009 403 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 CCSER2Q9H7U1 834 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 GKN1Q9NS71 199 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 DUS2Q9NX74 493 aaKnown RBP12.75□□□□□ -0.37
SRP54-206ENST00000555317 TAB2Q9NYJ8 693 aa12.75□□□□□ -0.37
SRP54-206ENST00000555317 KIF26AQ9ULI4 1882 aaPredicted RBP12.74□□□□□ -0.37
SRP54-206ENST00000555317 FAM92AA1XBS5 289 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 FAM170BA6NMN3 283 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 HHLA1C9JL84 531 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 LEFTY2O00292 366 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 O00370 1275 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 SLC9A3R1O14745 358 aaPredicted RBP12.74□□□□□ -0.37
SRP54-206ENST00000555317 COCHO43405 550 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 TLR5O60602 858 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 RALAP11233 206 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 CD72P21854 359 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 BRD2P25440 801 aaKnown RBP12.74□□□□□ -0.37
SRP54-206ENST00000555317 TKTL1P51854 596 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 TNK2Q07912 1038 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 PDE4CQ08493 712 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 ANO6Q4KMQ2 910 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 CDKAL1Q5VV42 579 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 SNX30Q5VWJ9 437 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 LCLAT1Q6UWP7 414 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 RSRC2Q7L4I2 434 aaKnown RBP12.74□□□□□ -0.37
SRP54-206ENST00000555317 CCDC186Q7Z3E2 898 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 TTC30AQ86WT1 665 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 TMEM105Q8N8V8 129 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 OSCP1Q8WVF1 389 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 FAM3CQ92520 227 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 EBF3Q9H4W6 596 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 LTB4R2Q9NPC1 389 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 FANCLQ9NW38 375 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 GTSE1Q9NYZ3 720 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 CFAP97Q9P2B7 532 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 NDRG2Q9UN36 371 aaKnown RBP12.74□□□□□ -0.37
SRP54-206ENST00000555317 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms