RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SP2Q02086 613 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 TAP1Q03518 808 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 ASPHQ12797 758 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 MAMLD1Q13495 774 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 TARBP2Q15633 366 aaKnown RBP11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 TMEM270Q6UE05 265 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 LRRC6Q86X45 466 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 WDR49Q8IV35 697 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 PPIL6Q8IXY8 311 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 DTX3LQ8TDB6 740 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 PYROXD1Q8WU10 500 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 FAM167AQ96KS9 214 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 C11orf70Q9BRQ4 267 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 SIKE1Q9BRV8 207 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 WWP1Q9H0M0 922 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 APOBEC3GQ9HC16 384 aaKnown RBP11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 ARHGEF4Q9NR80 690 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 METTL5Q9NRN9 209 aaKnown RBP11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 CNTN3Q9P232 1028 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 TAGLN3Q9UI15 199 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 STRIP2Q9ULQ0 834 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 EFR3BQ9Y2G0 817 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 AFG3L2Q9Y4W6 797 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 CNTNAP2Q9UHC6 1331 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 KIAA1217Q5T5P2 1943 aa11.15□□□□□ -0.62
MTHFD1-210ENST00000555252 B2RBV5 119 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 SPECC1L-ADORA2AF8WAN1 911 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 LPXNO60711 386 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 UBTFL6P0CB48 400 aaPredicted RBP11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 SETSIPP0DME0 302 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 TGFB3P10600 412 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 RGS2P41220 211 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 ZNF132P52740 706 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 CDC16Q13042 620 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 NCOA4Q13772 614 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 FASTKD3Q14CZ7 662 aaKnown RBP11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 ANGEL2Q5VTE6 544 aaKnown RBP11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 LMBRD2Q68DH5 695 aaPredicted RBP11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 BRSK2Q8IWQ3 736 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 UBR7Q8N806 425 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 DCAKDQ8WVC6 231 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 JADE3Q92613 823 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 SLITRK1Q96PX8 696 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 TUBGCP5Q96RT8 1024 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 TARS2Q9BW92 718 aaKnown RBP11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 UBE2OQ9C0C9 1292 aaKnown RBP11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 ZNF518BQ9C0D4 1074 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 DDX56Q9NY93 547 aaKnown RBP11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 DNPEPQ9ULA0 475 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 TELO2Q9Y4R8 837 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 SNCAIPQ9Y6H5 919 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 CLUHO75153 1309 aa11.15□□□□□ -0.63
MTHFD1-210ENST00000555252 TLR3O15455 904 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 MAFO75444 373 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 MT-ND3P03897 115 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 CCDC166P0CW27 439 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 MYL2P10916 166 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 RANBP1P43487 201 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 TAS2R40P59535 323 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 MED21Q13503 144 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 LLGL1Q15334 1064 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 DBN1Q16643 649 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 TMEM259Q4ZIN3 620 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 IER5Q5VY09 327 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 ATG16L1Q676U5 607 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 SPOPLQ6IQ16 392 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 RIPOR1Q6ZS17 1223 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 PDSS2Q86YH6 399 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 RIOX2Q8IUF8 465 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 NAT14Q8WUY8 206 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 MAML3Q96JK9 1138 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 ZBTB45Q96K62 511 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 CYTH2Q99418 400 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 MPHOSPH6Q99547 160 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 MRPL4Q9BYD3 311 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 FHDC1Q9C0D6 1143 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 HAPLN2Q9GZV7 340 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 MKS1Q9NXB0 559 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 PTTG2Q9NZH5 202 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 WASF2Q9Y6W5 498 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 PTPRJQ12913 1337 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 ZNF541Q9H0D2 1346 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 SSC5DA1L4H1 1573 aa11.14□□□□□ -0.63
MTHFD1-210ENST00000555252 I3L4J1 428 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 BUD23O43709 281 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 TOM1L1O75674 476 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 TMCC1O94876 653 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 ASS1P00966 412 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 MMP8P22894 467 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 AMPD1P23109 780 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 EDNRBP24530 442 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 STAT5BP51692 787 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 WNT7BP56706 349 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 YWHAEP62258 255 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 OVGP1Q12889 678 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 ULK2Q8IYT8 1036 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 TTC13Q8NBP0 860 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 OR6Y1Q8NGX8 325 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 ELMO3Q96BJ8 720 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 BTBD9Q96Q07 612 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms