RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 DCAF12L1Q5VU92 463 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 FYB2Q5VWT5 728 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 CRELD2Q6UXH1 353 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 TMC3Q7Z5M5 1100 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 SENP8Q96LD8 212 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 KATNAL1Q9BW62 490 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 PABPC3Q9H361 631 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 TRPC7Q9HCX4 862 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 TPX2Q9ULW0 747 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 MYH7BA7E2Y1 1941 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 SNAI1O95863 264 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 MCF2P10911 925 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 SP100P23497 879 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 IL9RQ01113 521 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 PRKCZQ05513 592 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 ZNF844Q08AG5 666 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 ZNF677Q86XU0 584 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 OR6P1Q8NGX9 317 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 RSRC1Q96IZ7 334 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 TGS1Q96RS0 853 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 DCLK3Q9C098 648 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 VIPAS39Q9H9C1 493 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 TMPRSS4Q9NRS4 437 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 SMPD4Q9NXE4 827 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 ZC3H7BQ9UGR2 993 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 AGPSO00116 658 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 IGF2BP3O00425 579 aaKnown RBP eCLIP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 C22orf31O95567 290 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 CD4P01730 458 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 ARL13BQ3SXY8 428 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 PREPLQ4J6C6 727 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 PMF1Q6P1K2 205 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 PIGZQ86VD9 579 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 MYLK4Q86YV6 388 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 ZNF512Q96ME7 567 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 TMEM134Q9H6X4 195 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 PLEKHA5Q9HAU0 1116 aa12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 CPSF3Q9UKF6 684 aaKnown RBP12.73□□□□□ -0.37
ARHGEF40-206ENST00000555232 A0A0A6YYK5 440 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 EME2A4GXA9 379 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 TSPAN1O60635 241 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 RBL1P28749 1068 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 AARSP49588 968 aaKnown RBP eCLIP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 POU5F1BQ06416 359 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 SNX17Q15036 470 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 LGSNQ5TDP6 509 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 FBXO36Q8NEA4 188 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 SKA2Q8WVK7 121 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 NTPCRQ9BSD7 190 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 MAGEB5Q9BZ81 275 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 ULBP1Q9BZM6 244 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 TRABDQ9H4I3 376 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 AP4E1Q9UPM8 1137 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 SLC27A5Q9Y2P5 690 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 H0Y3Z8 333 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 EEF2KO00418 725 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 DDX3YO15523 660 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 TSTA3Q13630 321 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 RAB6CQ53S08 254 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 RNF180Q86T96 592 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 PARP9Q8IXQ6 854 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 KIF2BQ8N4N8 673 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 ARMC2Q8NEN0 867 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 IPMKQ8NFU5 416 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 SGF29Q96ES7 293 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 KCNK16Q96T55 309 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 RAB6CQ9H0N0 254 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.72□□□□□ -0.373e-7■■■□□ 17.9
ARHGEF40-206ENST00000555232 SMIM28A0A1B0GU29 152 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 ASGR1P07306 291 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 ITIH2P19823 946 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 EIF3BP55884 814 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 TMPRSS15P98073 1019 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 SV2CQ496J9 727 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 PYROXD2Q8N2H3 581 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 GLIS1Q8NBF1 620 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 PPTC7Q8NI37 304 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 LMO3Q8TAP4 145 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 BORCS6Q96GS4 357 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 PIWIL1Q96J94 861 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 NIFKQ9BYG3 293 aaKnown RBP12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 SNX10Q9Y5X0 201 aa12.72□□□□□ -0.37
ARHGEF40-206ENST00000555232 CREB1P16220 341 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 FASTKD3Q14CZ7 662 aaKnown RBP12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 ATP11CQ8NB49 1132 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 SYT15Q9BQS2 421 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 YIPF3Q9GZM5 350 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 PCMTD2Q9NV79 361 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 DDX56Q9NY93 547 aaKnown RBP12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 MANSC4A6NHS7 340 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 KRT4P19013 534 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 C1QBPQ07021 282 aaKnown RBP12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 ILDR2Q71H61 639 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 TTC13Q8NBP0 860 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 RMDN2Q96LZ7 410 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 FSD1LQ9BXM9 530 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 CXCL16Q9H2A7 254 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 SARS2Q9NP81 518 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms