RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 MFAP3P55082 362 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 TBCCQ15814 346 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 DACT2Q5SW24 774 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 HAUS6Q7Z4H7 955 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 ELMO3Q96BJ8 720 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 ZMAT2Q96NC0 199 aaKnown RBP16.29■□□□□ 0.2
SYNE3-203ENST00000554873 PRPF18Q99633 342 aaKnown RBP16.29■□□□□ 0.2
SYNE3-203ENST00000554873 DCLK3Q9C098 648 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 NRDE2Q9H7Z3 1164 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 CAPN8A6NHC0 703 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 GRIN3BO60391 1043 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 MAPTP10636 758 aaKnown RBP16.28■□□□□ 0.2
SYNE3-203ENST00000554873 ITGB5P18084 799 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 NUP107P57740 925 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 MYBPC1Q00872 1141 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 CCNIQ14094 377 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 OGFRL1Q5TC84 451 aaPredicted RBP16.28■□□□□ 0.2
SYNE3-203ENST00000554873 MIER3Q7Z3K6 550 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 NEURL2Q9BR09 285 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 HERPUD2Q9BSE4 406 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 KCNK4Q9NYG8 393 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 TMOD2Q9NZR1 351 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 PPARGC1AQ9UBK2 798 aaKnown RBP16.28■□□□□ 0.2
SYNE3-203ENST00000554873 USP21Q9UK80 565 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 RAB26Q9ULW5 256 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 FAM237BA0A1B0GVD1 139 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 ARHGAP42A6NI28 874 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 PMM2O15305 246 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 NPR1P16066 1061 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 ZNF12P17014 697 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 ZNF200P98182 395 aaPredicted RBP16.28■□□□□ 0.2
SYNE3-203ENST00000554873 CREB5Q02930 508 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 TBC1D10BQ4KMP7 808 aaPredicted RBP16.28■□□□□ 0.2
SYNE3-203ENST00000554873 MDH1BQ5I0G3 518 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 DEPDC1Q5TB30 811 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 CBWD2Q8IUF1 395 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 CCDC127Q96BQ5 260 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 RIT2Q99578 217 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 MXRA8Q9BRK3 442 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 SOX13Q9UN79 622 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 ZHX2Q9Y6X8 837 aa16.28■□□□□ 0.2
SYNE3-203ENST00000554873 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 GOLGA8TH3BQL2 631 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 CCNT2O60583 730 aaKnown RBP16.27■□□□□ 0.2
SYNE3-203ENST00000554873 CALCAP01258 141 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 OCM2P0CE71 109 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 OCMP0CE72 109 aaPredicted RBP16.27■□□□□ 0.2
SYNE3-203ENST00000554873 GTF2BQ00403 316 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 ALCAMQ13740 583 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 STRIP1Q5VSL9 837 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 ACAD10Q6JQN1 1059 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 ELMSAN1Q6PJG2 1045 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 ISLR2Q6UXK2 745 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 CHSY1Q86X52 802 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 HELQQ8TDG4 1101 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 DDX1Q92499 740 aaKnown RBP16.27■□□□□ 0.2
SYNE3-203ENST00000554873 ATP6V0A1Q93050 837 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 ALKBH8Q96BT7 664 aaKnown RBP16.27■□□□□ 0.2
SYNE3-203ENST00000554873 EHMT1Q9H9B1 1298 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 VPS37BQ9H9H4 285 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 ALG13Q9NP73 1137 aaKnown RBP16.27■□□□□ 0.2
SYNE3-203ENST00000554873 SLC17A7Q9P2U7 560 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 INPP5FQ9Y2H2 1132 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 MRPL11Q9Y3B7 192 aaKnown RBP16.27■□□□□ 0.2
SYNE3-203ENST00000554873 MAD1L1Q9Y6D9 718 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 RARRES1P49788 294 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 PRPF39Q86UA1 669 aaKnown RBP16.27■□□□□ 0.2
SYNE3-203ENST00000554873 PPP4R1Q8TF05 950 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 DHX38Q92620 1227 aaKnown RBP16.27■□□□□ 0.2
SYNE3-203ENST00000554873 MRRFQ96E11 262 aaKnown RBP16.27■□□□□ 0.2
SYNE3-203ENST00000554873 DCUN1D1Q96GG9 259 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 APPL1Q9UKG1 709 aa16.27■□□□□ 0.2
SYNE3-203ENST00000554873 HEMK1Q9Y5R4 338 aaPredicted RBP16.27■□□□□ 0.2
SYNE3-203ENST00000554873 SLC16A4O15374 487 aa16.27■□□□□ 0.19
SYNE3-203ENST00000554873 LDHAP00338 332 aaKnown RBP16.27■□□□□ 0.19
SYNE3-203ENST00000554873 P4HBP07237 508 aaKnown RBP16.27■□□□□ 0.19
SYNE3-203ENST00000554873 SRGAP2CP0DJJ0 459 aa16.27■□□□□ 0.19
SYNE3-203ENST00000554873 SRGAP2BP0DMP2 458 aa16.27■□□□□ 0.19
SYNE3-203ENST00000554873 RAG1P15918 1043 aa16.27■□□□□ 0.19
SYNE3-203ENST00000554873 SERPINB6P35237 376 aa16.27■□□□□ 0.19
SYNE3-203ENST00000554873 SAPCD2Q86UD0 394 aa16.27■□□□□ 0.19
SYNE3-203ENST00000554873 LZTR1Q8N653 840 aa16.27■□□□□ 0.19
SYNE3-203ENST00000554873 CSRNP1Q96S65 589 aa16.27■□□□□ 0.19
SYNE3-203ENST00000554873 ADAM33Q9BZ11 813 aa16.27■□□□□ 0.19
SYNE3-203ENST00000554873 SCHIP1Q9P0W5 487 aaPredicted RBP16.27■□□□□ 0.19
SYNE3-203ENST00000554873 GIT1Q9Y2X7 761 aa16.27■□□□□ 0.19
SYNE3-203ENST00000554873 TMEM150BA6NC51 233 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 FAM58BPP0C7Q3 252 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 ADSSP30520 456 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 CA8P35219 290 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 CPOXP36551 454 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 ACAP1Q15027 740 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 IYDQ6PHW0 289 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 DCDC5Q6ZRR9 648 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 BANPQ8N9N5 519 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 DRC3Q9H069 523 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 GPRC5CQ9NQ84 441 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 KCNH7Q9NS40 1196 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 ANAPC7Q9UJX3 599 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms