RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 FAM180BQ6P0A1 224 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 LMBR1LQ6UX01 489 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 GTF3C2Q8WUA4 911 aaPredicted RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 TGFBRAP1Q8WUH2 860 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 MAP6Q96JE9 813 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 HEXIM2Q96MH2 286 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 SMARCA4P51532 1647 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 GRXCR2A6NFK2 248 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 KRT37O76014 449 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 BMP15O95972 392 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 CYP1A1P04798 512 aaPredicted RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 KELP23276 732 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 YWHABP31946 246 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 LRRC63Q05C16 580 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 FAM189A2Q15884 450 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 CALCRLQ16602 461 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 PARP6Q2NL67 630 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 DDIASQ8IXT1 998 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 MAGEB6Q8N7X4 407 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 RSAD2Q8WXG1 361 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 RIT1Q92963 219 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 TMEM120AQ9BXJ8 343 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 GDAP2Q9NXN4 497 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 SAC3D1A6NKF1 404 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 DNAJB1P25685 340 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 FMO4P31512 558 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 YWHAHQ04917 246 aaPredicted RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 PICALMQ13492 652 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 COTL1Q14019 142 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 ECHDC2Q86YB7 292 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 SNF8Q96H20 258 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 SSX3Q99909 188 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 SAGE2PA6NJ88 616 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 RNF103O00237 685 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 WWP2O00308 870 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 ZBTB5O15062 677 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 OAZ2O95190 189 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 GPD2P43304 727 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 PCP4P48539 62 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 MORF4L2Q15014 288 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 RPS6KA2Q15349 733 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 KRT79Q5XKE5 535 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 ANKK1Q8NFD2 765 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 MTMR8Q96EF0 704 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 RBM15Q96T37 977 aaKnown RBP eCLIP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 ARMT1Q9H993 441 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 CENPBD1B2RD01 187 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 SULT1B1O43704 296 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 THEGLP0DJG4 465 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 MYL2P10916 166 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 CD83Q01151 205 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 DLG2Q15700 870 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 SLC30A10Q6XR72 485 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 GALNT13Q8IUC8 556 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ELMOD1Q8N336 334 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 SLC5A11Q8WWX8 675 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 EPS8L2Q9H6S3 715 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 KBTBD4Q9NVX7 518 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 DNAJC28Q9NX36 388 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ABCC4O15439 1325 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 LPXNO60711 386 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 PSIP1O75475 530 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 PRKD3O94806 890 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 TNNC2P02585 160 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 RUNX1T1Q06455 604 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 GRSF1Q12849 480 aaKnown RBP eCLIP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 LRRC8EQ6NSJ5 796 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 SYCE2Q6PIF2 218 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 USP43Q70EL4 1123 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 OR6P1Q8NGX9 317 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 TCF12Q99081 682 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 SENP7Q9BQF6 1050 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 TRIM8Q9BZR9 551 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 KIF17Q9P2E2 1029 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 NEDD4P46934 1319 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 A0A1B0GTH6 734 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ISPDA4D126 451 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 PRSS44E7EML9 344 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ADAM23O75077 832 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 MSH3P20585 1137 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 CFL1P23528 166 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 STAT1P42224 750 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ERVK-9P63128 1117 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 IFIT5Q13325 482 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 CNGA2Q16280 664 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 TNFAIP8L3Q5GJ75 292 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 DGKKQ5KSL6 1271 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 DCDC5Q6ZRR9 648 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 RBM43Q6ZSC3 357 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 METTL3Q86U44 580 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 GSTCDQ8NEC7 633 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 AGBL3Q8NEM8 1001 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ZFP28Q8NHY6 868 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 FAR1Q8WVX9 515 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 PNMA8BQ9ULN7 279 aaPredicted RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 PCDHGA11Q9Y5H2 935 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 FAM135BQ49AJ0 1406 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ARHGEF35A5YM69 484 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 PLD2O14939 933 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 CLIC2O15247 247 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms