RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 MAGEA9P43362 315 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 SLC6A11P48066 632 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 RAD23BP54727 409 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 SLC7A9P82251 487 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 CAMK4Q16566 473 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 ZNF528Q3MIS6 628 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 COBLL1Q53SF7 1204 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 TTI2Q6NXR4 508 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 UNC93AQ86WB7 457 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 SLC4A11Q8NBS3 891 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 SLC35C1Q96A29 364 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 CYFIP2Q96F07 1278 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 CSNK1G1Q9HCP0 422 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 RAB20Q9NX57 234 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 ZSCAN32Q9NX65 697 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 IL37Q9NZH6 218 aa19.29■□□□□ 0.68
SHMT2-206ENST00000553529 TRDMT1O14717 391 aaKnown RBP19.28■□□□□ 0.68
SHMT2-206ENST00000553529 KINO60870 393 aaKnown RBP19.28■□□□□ 0.68
SHMT2-206ENST00000553529 ZDHHC11BP0C7U3 371 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 FAM200BP0CF97 657 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 OPRD1P41143 372 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 CXCL12P48061 93 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 SEC13P55735 322 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 MORC3Q14149 939 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 LRRC32Q14392 662 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 PDGFRLQ15198 375 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 KIAA2013Q8IYS2 634 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 FBXL13Q8NEE6 735 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 NELFBQ8WX92 580 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 NDRG1Q92597 394 aaKnown RBP19.28■□□□□ 0.68
SHMT2-206ENST00000553529 P2RY11Q96G91 374 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 SLITRK1Q96PX8 696 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 HNRNPABQ99729 332 aaKnown RBP19.28■□□□□ 0.68
SHMT2-206ENST00000553529 TSG101Q99816 390 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 P2RY13Q9BPV8 354 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 NT5C1AQ9BXI3 368 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 IMPG2Q9BZV3 1241 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 CISHQ9NSE2 258 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 ZMYM5Q9UJ78 669 aa19.28■□□□□ 0.68
SHMT2-206ENST00000553529 ATP8B3O60423 1300 aa19.27■□□□□ 0.68
SHMT2-206ENST00000553529 SOBPA7XYQ1 873 aa19.27■□□□□ 0.68
SHMT2-206ENST00000553529 HRO43593 1189 aa19.27■□□□□ 0.68
SHMT2-206ENST00000553529 ACO1P21399 889 aaKnown RBP19.27■□□□□ 0.68
SHMT2-206ENST00000553529 FKBP3Q00688 224 aaKnown RBP19.27■□□□□ 0.68
SHMT2-206ENST00000553529 SPEM1Q8N4L4 309 aa19.27■□□□□ 0.68
SHMT2-206ENST00000553529 CPA6Q8N4T0 437 aa19.27■□□□□ 0.68
SHMT2-206ENST00000553529 ATRIPQ8WXE1 791 aa19.27■□□□□ 0.68
SHMT2-206ENST00000553529 MSANTD3Q96H12 275 aa19.27■□□□□ 0.68
SHMT2-206ENST00000553529 MED15Q96RN5 788 aa19.27■□□□□ 0.68
SHMT2-206ENST00000553529 HINFPQ9BQA5 517 aa19.27■□□□□ 0.68
SHMT2-206ENST00000553529 CYP3A43Q9HB55 503 aa19.27■□□□□ 0.68
SHMT2-206ENST00000553529 EML5Q05BV3 1969 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 A0A1W2PQH9 124 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 FAM92AA1XBS5 289 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 TRIM24O15164 1050 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 SLC16A3O15427 465 aaKnown RBP19.26■□□□□ 0.67
SHMT2-206ENST00000553529 RTN3O95197 1032 aaPredicted RBP19.26■□□□□ 0.67
SHMT2-206ENST00000553529 GTF2H1P32780 548 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 CCR3P51677 355 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 DGKKQ5KSL6 1271 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 SCD5Q86SK9 330 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 BBS7Q8IWZ6 715 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 ATP2A3Q93084 1043 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 CEP295NLQ96MC4 621 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 HEXIM2Q96MH2 286 aaKnown RBP19.26■□□□□ 0.67
SHMT2-206ENST00000553529 HHIPQ96QV1 700 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 SMG5Q9UPR3 1016 aaKnown RBP19.26■□□□□ 0.67
SHMT2-206ENST00000553529 PCDHGA2Q9Y5H1 932 aa19.26■□□□□ 0.67
SHMT2-206ENST00000553529 GREM1O60565 184 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 TCF3P15923 654 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 GRSF1Q12849 480 aaKnown RBP eCLIP19.25■□□□□ 0.67
SHMT2-206ENST00000553529 DHCR24Q15392 516 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 HECTD3Q5T447 861 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 RHBDF2Q6PJF5 856 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 ZC3H14Q6PJT7 736 aaKnown RBP19.25■□□□□ 0.67
SHMT2-206ENST00000553529 TTC30AQ86WT1 665 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 UBR7Q8N806 425 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 RPLP0P6Q8NHW5 317 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 CD101Q93033 1021 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 CCDC34Q96HJ3 373 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 ZSWIM1Q9BR11 485 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 ARMCX3Q9UH62 379 aaPredicted RBP19.25■□□□□ 0.67
SHMT2-206ENST00000553529 GPR179Q6PRD1 2367 aa19.25■□□□□ 0.67
SHMT2-206ENST00000553529 CHRM1P11229 460 aaPredicted RBP19.24■□□□□ 0.67
SHMT2-206ENST00000553529 FMO5P49326 533 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 LRRC63Q05C16 580 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 KDSRQ06136 332 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 ENPEPQ07075 957 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 CUL2Q13617 745 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 GOLGA7BQ2TAP0 167 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 EMC10Q5UCC4 262 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 PRR23BQ6ZRT6 265 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 ARHGEF19Q8IW93 802 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 ADGRG2Q8IZP9 1017 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 NAT16Q8N8M0 369 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 ERLEC1Q96DZ1 483 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 TMEM176AQ96HP8 235 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 EPC1Q9H2F5 836 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 PARD6AQ9NPB6 346 aa19.24■□□□□ 0.67
SHMT2-206ENST00000553529 COQ4Q9Y3A0 265 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms