RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 DHTKD1Q96HY7 919 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-207ENST00000553290 FAM124BQ9H5Z6 455 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-207ENST00000553290 ARMCX3Q9UH62 379 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-207ENST00000553290 CPQQ9Y646 472 aa13.72□□□□□ -0.21
ACTN1-207ENST00000553290 TRIM49BA6NDI0 452 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 SLC9A3R1O14745 358 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-207ENST00000553290 ATG13O75143 517 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 BEST1O76090 585 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 ZDHHC11BP0C7U3 371 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 MBL2P11226 248 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-207ENST00000553290 DRD1P21728 446 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 ADORA2BP29275 332 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 TUBP50607 506 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 GALK1P51570 392 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 ZXDBP98169 803 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 FBXO43Q4G163 708 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 DCAF17Q5H9S7 520 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-207ENST00000553290 HECTD3Q5T447 861 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 FSTL4Q6MZW2 842 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 Q6ZS52 159 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 SUMF1Q8NBK3 374 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 WHAMMQ8TF30 809 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 CHFRQ96EP1 664 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 TWNKQ96RR1 684 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 P2RY13Q9BPV8 354 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 LINC00597Q9H2U6 94 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 METTL14Q9HCE5 456 aaKnown RBP13.71□□□□□ -0.21
ACTN1-207ENST00000553290 PNPLA8Q9NP80 782 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 CHORDC1Q9UHD1 332 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-207ENST00000553290 MAN1B1Q9UKM7 699 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 COQ4Q9Y3A0 265 aa13.71□□□□□ -0.21
ACTN1-207ENST00000553290 COCHO43405 550 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 ISM2Q6H9L7 571 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 FOXR2Q6PJQ5 311 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 CLEC20AQ6ZU45 233 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 FILIP1Q7Z7B0 1213 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 RUBCNQ92622 972 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 CD101Q93033 1021 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 CEP63Q96MT8 703 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 EPC1Q9H2F5 836 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 TLR8Q9NR97 1041 aaKnown RBP13.7□□□□□ -0.22
ACTN1-207ENST00000553290 SMPD4Q9NXE4 827 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 GMIPQ9P107 970 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 TBC1D14Q9P2M4 693 aa13.7□□□□□ -0.22
ACTN1-207ENST00000553290 ZNF292O60281 2723 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 E2F8A0AVK6 867 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 BICDL2A1A5D9 508 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 K7ESF4 209 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 GADD45BO75293 160 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-207ENST00000553290 HOXA6P31267 233 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 MORC3Q14149 939 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 CBWD6Q4V339 395 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 ZNF394Q53GI3 561 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 CBWD3Q5JTY5 395 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 CBWD5Q5RIA9 395 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 PPP1R26Q5T8A7 1209 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-207ENST00000553290 ADGRG2Q8IZP9 1017 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 CCDC26Q8TAB7 109 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 TATDN2Q93075 761 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 SLC35C1Q96A29 364 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 HEXIM2Q96MH2 286 aaKnown RBP13.69□□□□□ -0.22
ACTN1-207ENST00000553290 HINFPQ9BQA5 517 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 DUSP16Q9BY84 665 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 CISHQ9NSE2 258 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 CFAP97Q9P2B7 532 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 SCML2Q9UQR0 700 aa13.69□□□□□ -0.22
ACTN1-207ENST00000553290 EP300Q09472 2414 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-207ENST00000553290 GVINP1Q7Z2Y8 2422 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 CHURC1-FNTBB4DL54 471 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 PPP1R3GB7ZBB8 358 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 HHLA1C9JL84 531 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 EGFP01133 1207 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
ACTN1-207ENST00000553290 ACO1P21399 889 aaKnown RBP13.68□□□□□ -0.22
ACTN1-207ENST00000553290 CNR2P34972 360 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 YWHAEP62258 255 aaKnown RBP13.68□□□□□ -0.22
ACTN1-207ENST00000553290 CCDC40Q4G0X9 1142 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 KLHL10Q6JEL2 608 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 LONP2Q86WA8 852 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 SLC4A11Q8NBS3 891 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 SECISBP2LQ93073 1101 aaKnown RBP13.68□□□□□ -0.22
ACTN1-207ENST00000553290 OTUB2Q96DC9 234 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 TMEM176AQ96HP8 235 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 ZFRQ96KR1 1074 aaKnown RBP13.68□□□□□ -0.22
ACTN1-207ENST00000553290 DUSP9Q99956 384 aaKnown RBP13.68□□□□□ -0.22
ACTN1-207ENST00000553290 NACA2Q9H009 215 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 CCSER2Q9H7U1 834 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 FBRSL1Q9HCM7 1045 aaKnown RBP13.68□□□□□ -0.22
ACTN1-207ENST00000553290 SMG5Q9UPR3 1016 aaKnown RBP13.68□□□□□ -0.22
ACTN1-207ENST00000553290 SH3BP1Q9Y3L3 701 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 OTOGLQ3ZCN5 2332 aa13.68□□□□□ -0.22
ACTN1-207ENST00000553290 MYO16Q9Y6X6 1858 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 PMM2O15305 246 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 TLR5O60602 858 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 RNF40O75150 1001 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 CYP17A1P05093 508 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 BMP6P22004 513 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 FNTBP49356 437 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 PSEN1P49768 467 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 KIF11P52732 1056 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms