RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SNRNP35Q16560 246 aaKnown RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 UAP1L1Q3KQV9 507 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 WDR72Q3MJ13 1102 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 EOGTQ5NDL2 527 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 N4BP2L1Q5TBK1 243 aaPredicted RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 FAM171BQ6P995 826 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 LPCAT2Q7L5N7 544 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 TRMT11Q7Z4G4 463 aaKnown RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 FILIP1Q7Z7B0 1213 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 CBWD2Q8IUF1 395 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 IQUBQ8NA54 791 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 ZSWIM2Q8NEG5 633 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 PDZD8Q8NEN9 1154 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 WHAMMQ8TF30 809 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 ZNF516Q92618 1163 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 FBXO32Q969P5 355 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 DHX58Q96C10 678 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 PCED1BQ96HM7 432 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 INTS4Q96HW7 963 aaKnown RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 SLC22A12Q96S37 553 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 PPP1R9BQ96SB3 815 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 PNKPQ96T60 521 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 STRA6Q9BX79 667 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 NUSAP1Q9BXS6 441 aaKnown RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 DUSP15Q9H1R2 295 aaPredicted RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 LINC00597Q9H2U6 94 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 FBRSL1Q9HCM7 1045 aaKnown RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 TMEM9BQ9NQ34 198 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 TBC1D14Q9P2M4 693 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 SIX4Q9UIU6 781 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 CPQQ9Y646 472 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 ANAPC1Q9H1A4 1944 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 BCLAF3A2AJT9 711 aaKnown RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 C4orf47A7E2U8 309 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 F8VP50 259 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 EIF3DO15371 548 aaKnown RBP eCLIP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 HCRTO43612 131 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 KCNK5O95279 499 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 ADH5P11766 374 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 P4HA1P13674 534 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 TCF3P15923 654 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 PTPN1P18031 435 aaKnown RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 LMO2P25791 158 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 YWHAQP27348 245 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 HOXC13P31276 330 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 WNT7BP56706 349 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 LMAN2Q12907 356 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 TAF10Q12962 218 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 HSF5Q4G112 596 aaPredicted RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 PLA2G2CQ5R387 149 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 FAM26FQ5R3K3 315 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 TCEAL6Q6IPX3 200 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 SDE2Q6IQ49 451 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 FAM173BQ6P4H8 233 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 TRAPPC11Q7Z392 1133 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 GAS2L3Q86XJ1 694 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 PARP9Q8IXQ6 854 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 XXYLT1Q8NBI6 393 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 OR5B17Q8NGF7 314 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 USP33Q8TEY7 942 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 PIGKQ92643 395 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 TCEAL3Q969E4 200 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 SYAP1Q96A49 352 aaPredicted RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 TNIP3Q96KP6 325 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 CNOT6LQ96LI5 555 aaKnown RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 LSM14BQ9BX40 385 aaKnown RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 GZF1Q9H116 711 aaPredicted RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 SLC32A1Q9H598 525 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 ARHGEF4Q9NR80 690 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 POLR3BQ9NW08 1133 aaPredicted RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 FAM13BQ9NYF5 915 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 GCNT4Q9P109 453 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 CFAP97Q9P2B7 532 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 MMP17Q9ULZ9 603 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 UBE4BO95155 1302 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 NCOR2Q9Y618 2525 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 MYH10P35580 1976 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 EML5Q05BV3 1969 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 CACNA1BQ00975 2339 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 SPTBN2O15020 2390 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 MYO16Q9Y6X6 1858 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 NUP205Q92621 2012 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 FRMD3A2A2Y4 597 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 TBC1D3BA6NDS4 549 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 ZNF840PA6NDX5 716 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 CLIC2O15247 247 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 SPTLC2O15270 562 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 STX6O43752 255 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 EXOC3O60645 756 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 KAT7O95251 611 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 KLF8O95600 359 aaPredicted RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 SNRPFP62306 86 aaKnown RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 NOP14P78316 857 aaKnown RBP9.24□□□□□ -0.93
TMEM116-217ENST00000552801 SLC7A9P82251 487 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 GAD2Q05329 585 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 KDSRQ06136 332 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 ZNF252P-AS1Q0IIN9 211 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 FOXC1Q12948 553 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 DHCR24Q15392 516 aa9.24□□□□□ -0.93
TMEM116-217ENST00000552801 CCDC142Q17RM4 750 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms