RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 UBA3Q8TBC4 463 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 ZNF606Q8WXB4 792 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 TFAP2BQ92481 460 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 SHC3Q92529 594 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 CYP2S1Q96SQ9 504 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 STK33Q9BYT3 514 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 LRRC4Q9HBW1 653 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 TRPC7Q9HCX4 862 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 TRAV19A0A0A6YYK7 116 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 FAM92AA1XBS5 289 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 HHLA1C9JL84 531 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 NRG2O14511 850 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-225ENST00000551845 XPO1O14980 1071 aaKnown RBP11.2□□□□□ -0.62
PTCH1-225ENST00000551845 CYP26A1O43174 497 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 USP17L7P0C7H9 530 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 PSMC3P17980 439 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 BRD2P25440 801 aaKnown RBP11.2□□□□□ -0.62
PTCH1-225ENST00000551845 KIF11P52732 1056 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 ZNF132P52740 706 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 BCAT1P54687 386 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 PDE4CQ08493 712 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 DRAP1Q14919 205 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-225ENST00000551845 SYCP1Q15431 976 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 DPY19L2P1Q6NXN4 242 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 LRSAM1Q6UWE0 723 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 TTC30AQ86WT1 665 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 MFSD6LQ8IWD5 586 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 YAF2Q8IY57 180 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 CELF5Q8N6W0 485 aaKnown RBP11.2□□□□□ -0.62
PTCH1-225ENST00000551845 NEK11Q8NG66 645 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 DEPDC1BQ8WUY9 529 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 KXD1Q9BQD3 176 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 TRMT61BQ9BVS5 477 aaKnown RBP11.2□□□□□ -0.62
PTCH1-225ENST00000551845 PLA2G2FQ9BZM2 168 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 TSPY26PQ9H489 355 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 TLR8Q9NR97 1041 aaKnown RBP11.2□□□□□ -0.62
PTCH1-225ENST00000551845 TDP1Q9NUW8 608 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 THG1LQ9NWX6 298 aaKnown RBP11.2□□□□□ -0.62
PTCH1-225ENST00000551845 OBP2AQ9NY56 170 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 SCML2Q9UQR0 700 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 DAAM1Q9Y4D1 1078 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 USP3Q9Y6I4 520 aa11.2□□□□□ -0.62
PTCH1-225ENST00000551845 PTPRZ1P23471 2315 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-225ENST00000551845 MTCL1Q9Y4B5 1905 aaKnown RBP11.19□□□□□ -0.62
PTCH1-225ENST00000551845 MED19A0JLT2 244 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-225ENST00000551845 HEPACAM2A8MVW5 462 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 ZNF263O14978 683 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 THAP12O43422 761 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 CKMP06732 381 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 SETSIPP0DME0 302 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 SRFP11831 508 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 GNA15P30679 374 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 KRT9P35527 623 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 PSEN1P49768 467 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 TKTL1P51854 596 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 POLR2FP61218 127 aaKnown RBP11.19□□□□□ -0.62
PTCH1-225ENST00000551845 GPC5P78333 572 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 PFKPQ01813 784 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 HECTD3Q5T447 861 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 SNX30Q5VWJ9 437 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 APTXQ7Z2E3 356 aaKnown RBP11.19□□□□□ -0.62
PTCH1-225ENST00000551845 DGLUCYQ7Z3D6 616 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 FAM71AQ8IYT1 594 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 ARL14EPQ8N8R7 260 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-225ENST00000551845 SLC35F5Q8WV83 523 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 KCTD13Q8WZ19 329 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 IRF7Q92985 503 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 HSFY1Q96LI6 401 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 SPAG5Q96R06 1193 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 ERGIC2Q96RQ1 377 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 ZSWIM1Q9BR11 485 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 NAA15Q9BXJ9 866 aaKnown RBP11.19□□□□□ -0.62
PTCH1-225ENST00000551845 NACA2Q9H009 215 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 PDCL3Q9H2J4 239 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 FAM207AQ9NSI2 230 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-225ENST00000551845 WNT16Q9UBV4 365 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 DUSP12Q9UNI6 340 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.19□□□□□ -0.62
PTCH1-225ENST00000551845 FHOD1Q9Y613 1164 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 SPTBN4Q9H254 2564 aa11.19□□□□□ -0.62
PTCH1-225ENST00000551845 NCANO14594 1321 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 C2orf78A6NCI8 922 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 M0QYV0 167 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 TEX33O43247 280 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 NARSO43776 548 aaKnown RBP11.18□□□□□ -0.62
PTCH1-225ENST00000551845 TADA3O75528 432 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 ZBED1O96006 694 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 CALCAP01258 141 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 CFHP08603 1231 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 ZDHHC11BP0C7U3 371 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 RALAP11233 206 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 FCARP24071 287 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 CLCN1P35523 988 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 STAT1P42224 750 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 GPD2P43304 727 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 PLA2G4AP47712 749 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 KLK7P49862 253 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 ZNF268Q14587 947 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-225ENST00000551845 NR1I3Q14994 352 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 PKDCCQ504Y2 493 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms