RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 PIGZQ86VD9 579 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 GLIS1Q8NBF1 620 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 BBOF1Q8ND07 529 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 CCHCR1Q8TD31 782 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 ATP6V1G3Q96LB4 118 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 TMEM121Q9BTD3 319 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 SQORQ9Y6N5 450 aa20.03■□□□□ 0.8
BRF1-215ENST00000549655 CAPN15O75808 1086 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 ENDOD1O94919 500 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 CKBP12277 381 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 NPR3P17342 541 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 ARSEP51690 589 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 APLP1P51693 650 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 EIF3BP55884 814 aaKnown RBP20.02■□□□□ 0.8
BRF1-215ENST00000549655 DMTNQ08495 405 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 IFFO1Q0D2I5 559 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 MMRN1Q13201 1228 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 BOLA3Q53S33 107 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 ZNF771Q7L3S4 317 aaPredicted RBP20.02■□□□□ 0.8
BRF1-215ENST00000549655 ARCQ7LC44 396 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 TSEN34Q9BSV6 310 aaKnown RBP20.02■□□□□ 0.8
BRF1-215ENST00000549655 MED10Q9BTT4 135 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 FRMD8P1Q9BZ68 369 aaPredicted RBP20.02■□□□□ 0.8
BRF1-215ENST00000549655 CENPHQ9H3R5 247 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 CRTAC1Q9NQ79 661 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 AAASQ9NRG9 546 aa20.02■□□□□ 0.8
BRF1-215ENST00000549655 CAND2O75155 1236 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 BEST1O76090 585 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 NUDT17P0C025 328 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 ZSCAN5DPP0CG00 497 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 SKIP12755 728 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 TFE3P19532 575 aaPredicted RBP20.01■□□□□ 0.79
BRF1-215ENST00000549655 CHKAP35790 457 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 PTPN9P43378 593 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 HDAC4P56524 1084 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 TIGD5Q53EQ6 642 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 IZUMO3Q5VZ72 239 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 NCAPGQ9BPX3 1015 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 SYT15Q9BQS2 421 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 MAK16Q9BXY0 300 aaKnown RBP20.01■□□□□ 0.79
BRF1-215ENST00000549655 HMX1Q9NP08 348 aaPredicted RBP20.01■□□□□ 0.79
BRF1-215ENST00000549655 UBN1Q9NPG3 1134 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 INPP5FQ9Y2H2 1132 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 CEP350Q5VT06 3117 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 HMGB1P1B2RPK0 211 aaPredicted RBP20.01■□□□□ 0.79
BRF1-215ENST00000549655 SGK1O00141 431 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 ETS1P14921 441 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 MAP2K2P36507 400 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 ADIGQ0VDE8 80 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 DPYSL3Q14195 570 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 SLC29A2Q14542 456 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 P3H1Q32P28 736 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 ECHDC2Q86YB7 292 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 TEKT4Q8WW24 435 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 TSPYL1Q9H0U9 437 aa20.01■□□□□ 0.79
BRF1-215ENST00000549655 A0A1W2PQ45 241 aaPredicted RBP20■□□□□ 0.79
BRF1-215ENST00000549655 A0A1W2PQY0 241 aa20■□□□□ 0.79
BRF1-215ENST00000549655 APOC4-APOC2K7ER74 178 aa20■□□□□ 0.79
BRF1-215ENST00000549655 B3GAT3O94766 335 aa20■□□□□ 0.79
BRF1-215ENST00000549655 APOC2P02655 101 aa20■□□□□ 0.79
BRF1-215ENST00000549655 SHBGP04278 402 aa20■□□□□ 0.79
BRF1-215ENST00000549655 GRIK3Q13003 919 aa20■□□□□ 0.79
BRF1-215ENST00000549655 KRT81Q14533 505 aa20■□□□□ 0.79
BRF1-215ENST00000549655 EFHC1Q5JVL4 640 aa20■□□□□ 0.79
BRF1-215ENST00000549655 UBAP2Q5T6F2 1119 aaKnown RBP20■□□□□ 0.79
BRF1-215ENST00000549655 CLEC20AQ6ZU45 233 aa20■□□□□ 0.79
BRF1-215ENST00000549655 MAP7D3Q8IWC1 876 aa20■□□□□ 0.79
BRF1-215ENST00000549655 TBCBQ99426 244 aa20■□□□□ 0.79
BRF1-215ENST00000549655 C11orf84Q9BUA3 381 aaPredicted RBP20■□□□□ 0.79
BRF1-215ENST00000549655 GPATCH2LQ9NWQ4 482 aa20■□□□□ 0.79
BRF1-215ENST00000549655 BRCA2P51587 3418 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 TDRD15B5MCY1 1934 aaKnown RBP19.99■□□□□ 0.79
BRF1-215ENST00000549655 RIPK2O43353 540 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 FAM200BP0CF97 657 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 PDK2Q15119 407 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 KRT71Q3SY84 523 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 ZC3H12AQ5D1E8 599 aaKnown RBP19.99■□□□□ 0.79
BRF1-215ENST00000549655 DNAJC21Q5F1R6 531 aaKnown RBP19.99■□□□□ 0.79
BRF1-215ENST00000549655 SLAIN1Q8ND83 568 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 NDRG1Q92597 394 aaKnown RBP19.99■□□□□ 0.79
BRF1-215ENST00000549655 CENPIQ92674 756 aaPredicted RBP19.99■□□□□ 0.79
BRF1-215ENST00000549655 DDX23Q9BUQ8 820 aaKnown RBP19.99■□□□□ 0.79
BRF1-215ENST00000549655 SNRNP25Q9BV90 132 aaKnown RBP19.99■□□□□ 0.79
BRF1-215ENST00000549655 ADAM33Q9BZ11 813 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 LRRC4CQ9HCJ2 640 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 STARD7Q9NQZ5 370 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 KRT82Q9NSB4 513 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 MYBPHLA2RUH7 354 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 I3L4J1 428 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 IFNB1P01574 187 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 PECAM1P16284 738 aaPredicted RBP19.99■□□□□ 0.79
BRF1-215ENST00000549655 VEGFBP49765 207 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 MAP3K7CLP57077 242 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 GPS1Q13098 491 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 TUSC3Q13454 348 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 PAN2Q504Q3 1202 aaKnown RBP19.99■□□□□ 0.79
BRF1-215ENST00000549655 HIBCHQ6NVY1 386 aaPredicted RBP19.99■□□□□ 0.79
BRF1-215ENST00000549655 TRAF7Q6Q0C0 670 aa19.99■□□□□ 0.79
BRF1-215ENST00000549655 TRMT10CQ7L0Y3 403 aaKnown RBP19.99■□□□□ 0.79
BRF1-215ENST00000549655 ZNF598Q86UK7 904 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms