RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 SLC16A3O15427 465 aaKnown RBP19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 CILPO75339 1184 aa19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 NFATC1O95644 943 aa19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 ZDHHC11BP0C7U3 371 aa19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 TUBP50607 506 aa19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 LRRC63Q05C16 580 aa19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 ORC1Q13415 861 aa19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 HECTD3Q5T447 861 aa19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 CYFIP2Q96F07 1278 aa19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 FBRSL1Q9HCM7 1045 aaKnown RBP19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.75■□□□□ 0.752e-11■■■■■ 173.1
CHMP1A-207ENST00000549328 RAB20Q9NX57 234 aa19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 CHURC1-FNTBB4DL54 471 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 BEST1O76090 585 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 FAM200BP0CF97 657 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 CNR2P34972 360 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 MXI1P50539 228 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 MAP3K7CLP57077 242 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 ANKRD40Q6AI12 368 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 ADGRG2Q8IZP9 1017 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 WHAMMQ8TF30 809 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 CD101Q93033 1021 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 TWNKQ96RR1 684 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 PNPLA8Q9NP80 782 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 FAM49BQ9NUQ9 324 aa19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 SMG5Q9UPR3 1016 aaKnown RBP19.74■□□□□ 0.75
CHMP1A-207ENST00000549328 SPTBN4Q9H254 2564 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 COCHO43405 550 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 EGFP01133 1207 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 MBL2P11226 248 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 PPP1R2P41236 205 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 STIM1Q13586 685 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 LONP2Q86WA8 852 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 SEMA4DQ92854 862 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 ERCC4Q92889 916 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 SECISBP2LQ93073 1101 aaKnown RBP19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 DHTKD1Q96HY7 919 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 HINFPQ9BQA5 517 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 C2orf42Q9NWW7 574 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 SMPD4Q9NXE4 827 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 TBC1D14Q9P2M4 693 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 COQ4Q9Y3A0 265 aa19.73■□□□□ 0.75
CHMP1A-207ENST00000549328 E2F8A0AVK6 867 aa19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 PSMA7O14818 248 aa19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 CD58P19256 250 aa19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 PMS1P54277 932 aaKnown RBP19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 CLEC20AQ6ZU45 233 aa19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 FILIP1Q7Z7B0 1213 aa19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 CCDC26Q8TAB7 109 aa19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 DUSP9Q99956 384 aaKnown RBP19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 TLR8Q9NR97 1041 aaKnown RBP19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 GMIPQ9P107 970 aa19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 CFAP97Q9P2B7 532 aa19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 NCDNQ9UBB6 729 aa19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 CIZ1Q9ULV3 898 aaPredicted RBP19.72■□□□□ 0.75
CHMP1A-207ENST00000549328 CCDC163A0A0D9SF12 145 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 RNF40O75150 1001 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 ADORA2BP29275 332 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 FNTBP49356 437 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 TCERG1LQ5VWI1 586 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 NAIF1Q69YI7 327 aaPredicted RBP19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 PKN3Q6P5Z2 889 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 DCLK2Q8N568 766 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 GPR161Q8N6U8 529 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 OTUB2Q96DC9 234 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 ZFRQ96KR1 1074 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 CCSER2Q9H7U1 834 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 ARMCX3Q9UH62 379 aaPredicted RBP19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 RAB23Q9ULC3 237 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 SCML2Q9UQR0 700 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 MYH10P35580 1976 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 FRYLO94915 3013 aa19.71■□□□□ 0.75
CHMP1A-207ENST00000549328 HHLA1C9JL84 531 aa19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 DMWDQ09019 674 aa19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 DHCR24Q15392 516 aa19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 DCAF17Q5H9S7 520 aaPredicted RBP19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 FOXR2Q6PJQ5 311 aa19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 WDR5BQ86VZ2 330 aa19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 KIAA2013Q8IYS2 634 aa19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 CAMKK1Q8N5S9 505 aa19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 DUSP16Q9BY84 665 aa19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 METTL14Q9HCE5 456 aaKnown RBP19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 CISHQ9NSE2 258 aa19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 MAN1B1Q9UKM7 699 aa19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 SLC8A2Q9UPR5 921 aa19.7■□□□□ 0.74
CHMP1A-207ENST00000549328 TRIM49BA6NDI0 452 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 HRO43593 1189 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 TLR5O60602 858 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 CYP17A1P05093 508 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 OPRD1P41143 372 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 GAB4Q2WGN9 574 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 CBWD6Q4V339 395 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 ZNF394Q53GI3 561 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 CBWD3Q5JTY5 395 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 CBWD5Q5RIA9 395 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 PPP1R26Q5T8A7 1209 aaPredicted RBP19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 LAIR1Q6GTX8 287 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 RHBDF2Q6PJF5 856 aa19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 EZH1Q92800 747 aaPredicted RBP19.69■□□□□ 0.74
CHMP1A-207ENST00000549328 TATDN2Q93075 761 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms