RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 YWHAGP61981 247 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 MTM1Q13496 603 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 THOC5Q13769 683 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 NBPF20Q3BBV1 942 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 SNRNP48Q6IEG0 339 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 XYLT1Q86Y38 959 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 TAB3Q8N5C8 712 aaPredicted RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 SLC4A11Q8NBS3 891 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 SMC1BQ8NDV3 1235 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 ZFAND2BQ8WV99 257 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 GATA6Q92908 595 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 ZNF184Q99676 751 aaPredicted RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 MRPL4Q9BYD3 311 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 WWP1Q9H0M0 922 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 PAPOLBQ9NRJ5 636 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 METTL5Q9NRN9 209 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 PAK5Q9P286 719 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 CYTH4Q9UIA0 394 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 PLLPQ9Y342 182 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 BRWD3Q6RI45 1802 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 IGKV6D-21A0A0A0MT36 114 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 B2RBV5 119 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 TRIM49D1C9J1S8 452 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 E5RJQ4 531 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 OGTO15294 1046 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 MSCO60682 206 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 UPP2O95045 317 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 PRKCHP24723 683 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 ICAM3P32942 547 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 ROR2Q01974 943 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 SP2Q02086 613 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 TFDP2Q14188 446 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 TARBP2Q15633 366 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 ZNF699Q32M78 642 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 TRMT5Q32P41 509 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 DNAL1Q4LDG9 190 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 FAM47CQ5HY64 1035 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 THEMIS2Q5TEJ8 643 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 DARS2Q6PI48 645 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 CDHR3Q6ZTQ4 885 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 ALYREFQ86V81 257 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 ZC3H18Q86VM9 953 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 MFN1Q8IWA4 741 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 RTKN2Q8IZC4 609 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 DTX3LQ8TDB6 740 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 E2F7Q96AV8 911 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 FAF2Q96CS3 445 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 FAM161BQ96MY7 647 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 TEPSINQ96N21 525 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 NR1H4Q96RI1 486 aaPredicted RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 CALN1Q9BXU9 219 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 XYLT2Q9H1B5 865 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 C1orf21Q9H246 121 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 KRT82Q9NSB4 513 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 DDX43Q9NXZ2 648 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 SIRPGQ9P1W8 387 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 CPSF3Q9UKF6 684 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 USP18Q9UMW8 372 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 ADAMTS5Q9UNA0 930 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 PLA2G4CQ9UP65 541 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 TTLL3Q9Y4R7 772 aa10.29□□□□□ -0.76
SMARCD1-205ENST00000548573 C2orf71A6NGG8 1288 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 H3BRJ5 948 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 TM7SF2O76062 418 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 MYCNP04198 464 aaPredicted RBP10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 GABRB2P47870 512 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 YWHAZP63104 245 aaKnown RBP10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 BST1Q10588 318 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 HSF5Q4G112 596 aaPredicted RBP10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 C6orf163Q5TEZ5 329 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 CWF19L1Q69YN2 538 aaKnown RBP10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 PRPF39Q86UA1 669 aaKnown RBP10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 GALNT15Q8N3T1 639 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 EMC1Q8N766 993 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 PPM1NQ8N819 430 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 ZNF526Q8TF50 670 aaPredicted RBP10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 HSPH1Q92598 858 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 RTP4Q96DX8 246 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 MTBPQ96DY7 904 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 MCRS1Q96EZ8 462 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 CPXM1Q96SM3 734 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 TCHPQ9BT92 498 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 ASNSD1Q9NWL6 643 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 ARMCX1Q9P291 453 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 TJP2Q9UDY2 1190 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 PCSK1NQ9UHG2 260 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 TAGLN3Q9UI15 199 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 ZNF214Q9UL59 606 aaPredicted RBP10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 SSC5DA1L4H1 1573 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 COL4A5P29400 1685 aa10.28□□□□□ -0.76
SMARCD1-205ENST00000548573 TTLL13PA6NNM8 815 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 SPECC1L-ADORA2AF8WAN1 911 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 RFPL1O75677 317 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 CIB2O75838 187 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 ITGBL1O95965 494 aaPredicted RBP10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 ERBB2P04626 1255 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 HOXC6P09630 235 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 GNAT1P11488 350 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 CD19P15391 556 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 KCNA3P22001 575 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms