RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SMARCB1Q12824 385 aa18.35■□□□□ 0.53
HDAC7-227ENST00000548080 CLEC16AQ2KHT3 1053 aa18.35■□□□□ 0.53
HDAC7-227ENST00000548080 C4orf50Q6ZRC1 276 aa18.35■□□□□ 0.53
HDAC7-227ENST00000548080 SLC4A11Q8NBS3 891 aa18.35■□□□□ 0.53
HDAC7-227ENST00000548080 ZNF606Q8WXB4 792 aa18.35■□□□□ 0.53
HDAC7-227ENST00000548080 TMEM176AQ96HP8 235 aa18.35■□□□□ 0.53
HDAC7-227ENST00000548080 MYADMQ96S97 322 aa18.35■□□□□ 0.53
HDAC7-227ENST00000548080 IRX2Q9BZI1 471 aaPredicted RBP18.35■□□□□ 0.53
HDAC7-227ENST00000548080 ISCUQ9H1K1 167 aa18.35■□□□□ 0.53
HDAC7-227ENST00000548080 BTNL10A8MVZ5 291 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 FTLP02792 175 aaPredicted RBP18.34■□□□□ 0.53
HDAC7-227ENST00000548080 CEBPBP17676 345 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 PTPN2P17706 415 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 ADORA2BP29275 332 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 PLD1Q13393 1074 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 CFAP221Q4G0U5 840 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 ZNF569Q5MCW4 686 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 ACAD10Q6JQN1 1059 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 SYT10Q6XYQ8 523 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 PAQR9Q6ZVX9 377 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 FAM35AQ86V20 835 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 DNAAF5Q86Y56 855 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 SLC2A14Q8TDB8 520 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 TNIP3Q96KP6 325 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 NT5C1AQ9BXI3 368 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 COL25A1Q9BXS0 654 aaPredicted RBP18.34■□□□□ 0.53
HDAC7-227ENST00000548080 MAGED2Q9UNF1 606 aaPredicted RBP18.34■□□□□ 0.53
HDAC7-227ENST00000548080 PAXBP1Q9Y5B6 917 aa18.34■□□□□ 0.53
HDAC7-227ENST00000548080 MACROD2A1Z1Q3 448 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 ANKRD62A6NC57 917 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 CYP1A1P04798 512 aaPredicted RBP18.33■□□□□ 0.53
HDAC7-227ENST00000548080 TMEM253P0C7T8 217 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 CD19P15391 556 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 BRD2P25440 801 aaKnown RBP18.33■□□□□ 0.53
HDAC7-227ENST00000548080 GRIK1P39086 918 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 MAPRE1Q15691 268 aaKnown RBP18.33■□□□□ 0.53
HDAC7-227ENST00000548080 RTL10Q7L3V2 364 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 DNAJB7Q7Z6W7 309 aaPredicted RBP18.33■□□□□ 0.53
HDAC7-227ENST00000548080 UNC93AQ86WB7 457 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 FUKQ8N0W3 1084 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 RNF10Q8N5U6 811 aaKnown RBP18.33■□□□□ 0.53
HDAC7-227ENST00000548080 TFAP2BQ92481 460 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 ZNF592Q92610 1267 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 SECISBP2LQ93073 1101 aaKnown RBP18.33■□□□□ 0.53
HDAC7-227ENST00000548080 FUBP3Q96I24 572 aaKnown RBP eCLIP18.33■□□□□ 0.53
HDAC7-227ENST00000548080 ABCB6Q9NP58 842 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 PRKAG3Q9UGI9 489 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 DNAI1Q9UI46 699 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 KIAA1257Q9ULG3 409 aa18.33■□□□□ 0.53
HDAC7-227ENST00000548080 NCOR1O75376 2440 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 LOC730098B7Z3J9 87 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 F8VP50 259 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 MED7O43513 233 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 POU2F2P09086 479 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 VDRP11473 427 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 UNGP13051 313 aaPredicted RBP18.33■□□□□ 0.52
HDAC7-227ENST00000548080 VEPH1Q14D04 833 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 POTEHQ6S545 545 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 PDZD4Q76G19 769 aaPredicted RBP18.33■□□□□ 0.52
HDAC7-227ENST00000548080 TMC8Q8IU68 726 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 CRYBG2Q8N1P7 616 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 TDRD5Q8NAT2 981 aaKnown RBP18.33■□□□□ 0.52
HDAC7-227ENST00000548080 KIF18AQ8NI77 898 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 CTNNBL1Q8WYA6 563 aaPredicted RBP18.33■□□□□ 0.52
HDAC7-227ENST00000548080 PSMG2Q969U7 264 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 HEXIM2Q96MH2 286 aaKnown RBP18.33■□□□□ 0.52
HDAC7-227ENST00000548080 WDR24Q96S15 920 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 ZSWIM1Q9BR11 485 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 LRRC3Q9BY71 257 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 ASAH2Q9NR71 780 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 KRT82Q9NSB4 513 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 HSFX1Q9UBD0 423 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 PCDHGC3Q9UN70 934 aa18.33■□□□□ 0.52
HDAC7-227ENST00000548080 MRPS23Q9Y3D9 190 aaKnown RBP18.33■□□□□ 0.52
HDAC7-227ENST00000548080 A0A0A6YYK5 440 aaPredicted RBP18.32■□□□□ 0.52
HDAC7-227ENST00000548080 AP1G2O75843 785 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 CFHP08603 1231 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 CASQ1P31415 396 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 MAGEA11P43364 429 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 RPL10AP62906 217 aaKnown RBP18.32■□□□□ 0.52
HDAC7-227ENST00000548080 TAF12Q16514 161 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 PRSS36Q5K4E3 855 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 PPP1R2P3Q6NXS1 205 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 GJD3Q8N144 294 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 MCRS1Q96EZ8 462 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 CYFIP2Q96F07 1278 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 NOX5Q96PH1 765 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 KCNK16Q96T55 309 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 DNAI2Q9GZS0 605 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 NR2E1Q9Y466 385 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 GREB1Q4ZG55 1949 aa18.32■□□□□ 0.52
HDAC7-227ENST00000548080 BDP1A6H8Y1 2624 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 MYO10Q9HD67 2058 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 A0A1W2PRU2 124 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 C19orf67A6NJJ6 358 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 SLC38A8A6NNN8 435 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 MOSPD3O75425 235 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 BEST1O76090 585 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 LSM8O95777 96 aaKnown RBP18.31■□□□□ 0.52
HDAC7-227ENST00000548080 ASGR2P07307 311 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms