RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 MCEEQ96PE7 176 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 MRPL45Q9BRJ2 306 aaKnown RBP17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 HERPUD2Q9BSE4 406 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 TXLNGYQ9BZA5 131 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 KPNA7A9QM74 516 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 RALAP11233 206 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 LRPAP1P30533 357 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 GJC1P36383 396 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 PPP1R7Q15435 360 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 SOWAHAQ2M3V2 549 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 PPP1R15BQ5SWA1 713 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 SPOUT1Q5T280 376 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 CYP4A22Q5TCH4 519 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 KCTD16Q68DU8 428 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 CMTR2Q8IYT2 770 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 FBXO25Q8TCJ0 367 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 SLCO2A1Q92959 643 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 ZNF560Q96MR9 790 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 HEMGNQ9BXL5 484 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 TMEM161AQ9NX61 479 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 CACNG4Q9UBN1 327 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 STRIP2Q9ULQ0 834 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 ATP8A1Q9Y2Q0 1164 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 GOLGA6L10A6NI86 522 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 THP07101 528 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 PBX3P40426 434 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 PNPLA4P41247 253 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 TAF6P49848 677 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 SCNN1GP51170 649 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 SPDYCQ5MJ68 293 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 C3orf20Q8ND61 904 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 OR2W6PQ8NHA6 318 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 HEXIM2Q96MH2 286 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 OSBPL8Q9BZF1 889 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 DCLK3Q9C098 648 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 FAM124BQ9H5Z6 455 aaPredicted RBP17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 TMBIM4Q9HC24 238 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 CHST7Q9NS84 486 aa17.37■□□□□ 0.37
CHMP1A-204ENST00000547687 IGFBP6P24592 240 aaPredicted RBP17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 ACTN2P35609 894 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 LILRA4P59901 499 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 ZNF252P-AS1Q0IIN9 211 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 PIGHQ14442 188 aaPredicted RBP17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 CLLU1OSQ5K130 101 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 RCOR2Q8IZ40 523 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 TTC39CQ8N584 583 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 ATG4AQ8WYN0 398 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 ATP6V1G3Q96LB4 118 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 SAMD11Q96NU1 681 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 NT5C1AQ9BXI3 368 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 RSAD1Q9HA92 442 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 HOMER3Q9NSC5 361 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 SLC38A7Q9NVC3 462 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 MTRF1LQ9UGC7 380 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 NME7Q9Y5B8 376 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 BDP1A6H8Y1 2624 aa17.36■□□□□ 0.37
CHMP1A-204ENST00000547687 F8VP50 259 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 MYZAPP0CAP1 466 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 DNAJB1P25685 340 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 CETN2P41208 172 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 OGDHQ02218 1023 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 ZNF844Q08AG5 666 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 KLF1Q13351 362 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 PTPN20Q4JDL3 420 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 LEKR1Q6ZMV7 388 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 SH2D3CQ8N5H7 860 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 KLHL23Q8NBE8 558 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 RNF25Q96BH1 459 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 CASD1Q96PB1 797 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 GDAP2Q9NXN4 497 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 FEZ2Q9UHY8 353 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 CYTH4Q9UIA0 394 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 TDRD15B5MCY1 1934 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 HMGB1P1B2RPK0 211 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 VDRP11473 427 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 PMS2P54278 862 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 KRT17Q04695 432 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 SV2CQ496J9 727 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 ATP13A4Q4VNC1 1196 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 LRRC38Q5VT99 294 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 SYDE1Q6ZW31 735 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 DPH6Q7L8W6 267 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 OR6B3Q8NGW1 331 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 ATL2Q8NHH9 583 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 GRK7Q8WTQ7 553 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 ART4Q93070 314 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 PGBD4Q96DM1 585 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 MRPL38Q96DV4 380 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 THEGQ9P2T0 379 aa17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 R3HDM2Q9Y2K5 976 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-204ENST00000547687 SIGLEC16A6NMB1 481 aa17.34■□□□□ 0.37
CHMP1A-204ENST00000547687 C5orf67F2Z3F1 127 aa17.34■□□□□ 0.37
CHMP1A-204ENST00000547687 GOLGA8SH3BPF8 625 aa17.34■□□□□ 0.37
CHMP1A-204ENST00000547687 ITGB1P05556 798 aa17.34■□□□□ 0.37
CHMP1A-204ENST00000547687 SKIP12755 728 aa17.34■□□□□ 0.37
CHMP1A-204ENST00000547687 TCF4P15884 667 aa17.34■□□□□ 0.37
CHMP1A-204ENST00000547687 CCNG2Q16589 344 aa17.34■□□□□ 0.37
CHMP1A-204ENST00000547687 DNAJC21Q5F1R6 531 aaKnown RBP17.34■□□□□ 0.37
CHMP1A-204ENST00000547687 ZFYVE27Q5T4F4 411 aa17.34■□□□□ 0.37
CHMP1A-204ENST00000547687 ZNF598Q86UK7 904 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms