RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 ZNF276Q8N554 614 aa16.84■□□□□ 0.29
PRPF40A-212ENST00000545856 KREMEN2Q8NCW0 462 aa16.84■□□□□ 0.29
PRPF40A-212ENST00000545856 GOLGA1Q92805 767 aa16.84■□□□□ 0.29
PRPF40A-212ENST00000545856 KCNK16Q96T55 309 aa16.84■□□□□ 0.29
PRPF40A-212ENST00000545856 THAP2Q9H0W7 228 aa16.84■□□□□ 0.29
PRPF40A-212ENST00000545856 NSUN3Q9H649 340 aaKnown RBP16.84■□□□□ 0.29
PRPF40A-212ENST00000545856 ZMYM5Q9UJ78 669 aa16.84■□□□□ 0.29
PRPF40A-212ENST00000545856 SCML2Q9UQR0 700 aa16.84■□□□□ 0.29
PRPF40A-212ENST00000545856 TCRBV5S1A1TA0A578 114 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 CLASP2O75122 1294 aaKnown RBP16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 BEST1O76090 585 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 LRG1P02750 347 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 ERBB2P04626 1255 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 RRM1P23921 792 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 IRS1P35568 1242 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 TKTL1P51854 596 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 MRPS5P82675 430 aaKnown RBP16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 ADIGQ0VDE8 80 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 ACAP1Q15027 740 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 CMASQ8NFW8 434 aaPredicted RBP16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 GDPD5Q8WTR4 605 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 SLC22A17Q8WUG5 538 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 SLITRK1Q96PX8 696 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 CDK5RAP1Q96SZ6 601 aaKnown RBP16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 SELENOOQ9BVL4 669 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 TLE6Q9H808 572 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 TMEM30AQ9NV96 361 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 PYCARDQ9ULZ3 195 aa16.83■□□□□ 0.28
PRPF40A-212ENST00000545856 SOBPA7XYQ1 873 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 TULP2O00295 520 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 PAPSS1O43252 624 aaPredicted RBP16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 ZMYND10O75800 440 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 C8AP07357 584 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 KRT3P12035 628 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 PFKLP17858 780 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 ATF6P18850 670 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 ABCB4P21439 1286 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 CACNA2D1P54289 1103 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 DAOAP59103 153 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 MAMLD1Q13495 774 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 PPP1R15BQ5SWA1 713 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 ZNF697Q5TEC3 545 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 TMEM184AQ6ZMB5 413 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 MON1AQ86VX9 555 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 SYCE1Q8N0S2 351 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 CASP10Q92851 521 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 PSMG2Q969U7 264 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 ALS2CR12Q96Q35 445 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 CRISPLD1Q9H336 500 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 CLIC5Q9NZA1 410 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 CTTNBP2NLQ9P2B4 639 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 OBSL1O75147 1896 aa16.82■□□□□ 0.28
PRPF40A-212ENST00000545856 KIF2AO00139 706 aaPredicted RBP16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 XYLBO75191 536 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 SEC24AO95486 1093 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 YWHAQP27348 245 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 MAN1A1P33908 653 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 RGS7P49802 495 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 FAM102AQ5T9C2 384 aaPredicted RBP16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 SNX30Q5VWJ9 437 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 OR6B2Q6IFH4 312 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 DCUN1D2Q6PH85 259 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 FAM183BPQ6ZVS7 135 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 TADA2BQ86TJ2 420 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 TRIM58Q8NG06 486 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 SLC7A14Q8TBB6 771 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 ZNF564Q8TBZ8 553 aaPredicted RBP16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 NUP85Q9BW27 656 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 PACSIN1Q9BY11 444 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 LACRTQ9GZZ8 138 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 POPDC2Q9HBU9 364 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 SLC27A5Q9Y2P5 690 aa16.81■□□□□ 0.28
PRPF40A-212ENST00000545856 SLC38A8A6NNN8 435 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 DAB1O75553 588 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 LCP1P13796 627 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 SSTR3P32745 418 aaPredicted RBP16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 TUBP50607 506 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 YWHAZP63104 245 aaKnown RBP16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 KCNC3Q14003 757 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 TAF12Q16514 161 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 DDR2Q16832 855 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 PABPC1LQ4VXU2 614 aaKnown RBP16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 PPM1LQ5SGD2 360 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 C11orf63Q6NUN7 778 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 REXO1L1PQ8IX06 675 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 NIPA2Q8N8Q9 360 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 SLC35G2Q8TBE7 412 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 FEZF2Q8TBJ5 459 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 ULBP1Q9BZM6 244 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 CERS4Q9HA82 394 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 MAN1C1Q9NR34 630 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 TLR8Q9NR97 1041 aaKnown RBP16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 ABCC13Q9NSE7 274 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 IP6K2Q9UHH9 426 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 TMEM59LQ9UK28 342 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 STAP1Q9ULZ2 295 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 PCDHGC5Q9Y5F6 944 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 HCFC2Q9Y5Z7 792 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 CLUHO75153 1309 aa16.8■□□□□ 0.28
PRPF40A-212ENST00000545856 ANAPC1Q9H1A4 1944 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms