RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 C1QAP02745 245 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 OATP04181 439 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 RAB27AP51159 221 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 ACTR3P61158 418 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 YWHAGP61981 247 aaKnown RBP eCLIP9.12□□□□□ -0.95
TDP1-204ENST00000545686 AP2B1P63010 937 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 BAATQ14032 418 aaPredicted RBP9.12□□□□□ -0.95
TDP1-204ENST00000545686 NOMO1Q15155 1222 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 SMTNL2Q2TAL5 461 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 PTPN20Q4JDL3 420 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 TEX44Q53QW1 395 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 IGDCC3Q8IVU1 814 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 SCUBE1Q8IWY4 988 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 ARFGAP1Q8N6T3 406 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 RTP4Q96DX8 246 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 FAM161BQ96MY7 647 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 IL1RAPL1Q9NZN1 696 aa9.12□□□□□ -0.95
TDP1-204ENST00000545686 FAM237BA0A1B0GVD1 139 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 KLHL33A6NCF5 533 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 TRIM49D1C9J1S8 452 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 H3BRJ5 948 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 BIRC5O15392 142 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 FAM189A1O60320 539 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 FKBP6O75344 327 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 CSDE1O75534 798 aaKnown RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 RGS20O76081 388 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 ANPEPP15144 967 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 PRKCHP24723 683 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 CRABP2P29373 138 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 MAGEA6P43360 314 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 OAZ1P54368 228 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 CNTN2Q02246 1040 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 DSG1Q02413 1049 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 TFDP2Q14188 446 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 DUOXA2Q1HG44 320 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 FAM47CQ5HY64 1035 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 TMCO4Q5TGY1 634 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 ALYREFQ86V81 257 aaKnown RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 KCTD6Q8NC69 237 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 JOSD2Q8TAC2 188 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 SPATA18Q8TC71 538 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 DTX3LQ8TDB6 740 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 SLC7A3Q8WY07 619 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 TFAP2BQ92481 460 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 TMEM143Q96AN5 459 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 E2F7Q96AV8 911 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 LRRC39Q96DD0 335 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 FGD4Q96M96 766 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 STN1Q9H668 368 aaKnown RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 NDE1Q9NXR1 346 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 ETAA1Q9NY74 926 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 PAK5Q9P286 719 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 TRPC5Q9UL62 973 aaPredicted RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 MAFBQ9Y5Q3 323 aaPredicted RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 SPATA31C2B4DYI2 1134 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 E5RJQ4 531 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 VWA5AO00534 786 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 MAP3K13O43283 966 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 SNNO75324 88 aaPredicted RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 PIAS1O75925 651 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 ENDOD1O94919 500 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 CST3P01034 146 aaPredicted RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 SERPINA6P08185 405 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 AMPD1P23109 780 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 ASPAP45381 313 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 INHBEP58166 350 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 MYL6P60660 151 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 PSMC1P62191 440 aaKnown RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 YWHAZP63104 245 aaKnown RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 TMPRSS15P98073 1019 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 BST1Q10588 318 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 WASHC5Q12768 1159 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 RNF220Q5VTB9 566 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 DENND1BQ6P3S1 775 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 AAGABQ6PD74 315 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 ARCQ7LC44 396 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 TREML1Q86YW5 311 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 CRLF3Q8IUI8 442 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 KBTBD2Q8IY47 623 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 ULK2Q8IYT8 1036 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 SLC4A11Q8NBS3 891 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 RBM15BQ8NDT2 890 aaKnown RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 NIFKQ9BYG3 293 aaKnown RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 TRIM4Q9C037 500 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 MTMR12Q9C0I1 747 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 ASCC2Q9H1I8 757 aaPredicted RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 C10orf88Q9H8K7 445 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 METTL5Q9NRN9 209 aaKnown RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 ARMCX1Q9P291 453 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 PPARGC1AQ9UBK2 798 aaKnown RBP9.11□□□□□ -0.95
TDP1-204ENST00000545686 WASF2Q9Y6W5 498 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 ZSWIM8A7E2V4 1837 aa9.11□□□□□ -0.95
TDP1-204ENST00000545686 ADCY3O60266 1144 aa9.1□□□□□ -0.95
TDP1-204ENST00000545686 KRT38O76015 456 aa9.1□□□□□ -0.95
TDP1-204ENST00000545686 RNF8O76064 485 aa9.1□□□□□ -0.95
TDP1-204ENST00000545686 UPP2O95045 317 aa9.1□□□□□ -0.95
TDP1-204ENST00000545686 TRUB2O95900 331 aaKnown RBP9.1□□□□□ -0.95
TDP1-204ENST00000545686 ENO1P06733 434 aaKnown RBP9.1□□□□□ -0.95
TDP1-204ENST00000545686 CD48P09326 243 aa9.1□□□□□ -0.95
TDP1-204ENST00000545686 AOC1P19801 751 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms