RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 USP4Q13107 963 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 TMEM270Q6UE05 265 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 RRAGAQ7L523 313 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 DDX42Q86XP3 938 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCDC78-216ENST00000544996 CPA6Q8N4T0 437 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 ANKRD52Q8NB46 1076 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 CLDN23Q96B33 292 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 UBXN6Q9BZV1 441 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 INTS2Q9H0H0 1204 aaKnown RBP16.6■□□□□ 0.25
CCDC78-216ENST00000544996 SMPD4Q9NXE4 827 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 SCML2Q9UQR0 700 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 CPQQ9Y646 472 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 KMT2EQ8IZD2 1858 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 PTPRDP23468 1912 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 NUP210Q8TEM1 1887 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-216ENST00000544996 SHISA7A6NL88 538 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 HHLA1C9JL84 531 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 LEFTY2O00292 366 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 COCHO43405 550 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 RPS9P46781 194 aaKnown RBP16.59■□□□□ 0.25
CCDC78-216ENST00000544996 SOX9P48436 509 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 ANGPT1Q15389 498 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 GOLGA7BQ2TAP0 167 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 TRIM68Q6AZZ1 485 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 GPRIN1Q7Z2K8 1008 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 IRF2BP1Q8IU81 584 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 C1orf210Q8IVY1 113 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 UBR7Q8N806 425 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 KIAA1958Q8N8K9 716 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 RIN3Q8TB24 985 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 ATP2A3Q93084 1043 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 EXOC4Q96A65 974 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 FAM81BQ96LP2 452 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 HPS4Q9NQG7 708 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 TSPAN16Q9UKR8 245 aa16.59■□□□□ 0.25
CCDC78-216ENST00000544996 SLC9A3R1O14745 358 aaPredicted RBP16.58■□□□□ 0.24
CCDC78-216ENST00000544996 ARSAP15289 507 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 PSEN1P49768 467 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 KIF11P52732 1056 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 BCAT1P54687 386 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 NR1H3Q13133 447 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 LRRC32Q14392 662 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 SASS6Q6UVJ0 657 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 GBP6Q6ZN66 633 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 ENOSF1Q7L5Y1 443 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 PIGZQ86VD9 579 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 CCSER2Q9H7U1 834 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 LMAN1LQ9HAT1 526 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 SPATA6Q9NWH7 488 aaPredicted RBP16.58■□□□□ 0.24
CCDC78-216ENST00000544996 WNT6Q9Y6F9 365 aa16.58■□□□□ 0.24
CCDC78-216ENST00000544996 CYP26A1O43174 497 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 TLR5O60602 858 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 NFATC1O95644 943 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 STILQ15468 1287 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 MAN2A1Q16706 1144 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 EXOC3L4Q17RC7 722 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 EML3Q32P44 896 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 RBM43Q6ZSC3 357 aaKnown RBP16.57■□□□□ 0.24
CCDC78-216ENST00000544996 CCDC186Q7Z3E2 898 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 TADA2BQ86TJ2 420 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 ARHGEF19Q8IW93 802 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 ZNF687Q8N1G0 1237 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 KAT5Q92993 513 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 CRACR2AQ9BSW2 395 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 IER2Q9BTL4 223 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 ECT2Q9H8V3 914 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 UBE2TQ9NPD8 197 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-216ENST00000544996 CFAP97Q9P2B7 532 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 NAGPAQ9UK23 515 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 USP3Q9Y6I4 520 aa16.57■□□□□ 0.24
CCDC78-216ENST00000544996 GTPBP10A4D1E9 387 aaKnown RBP16.56■□□□□ 0.24
CCDC78-216ENST00000544996 O00370 1275 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 XPO1O14980 1071 aaKnown RBP16.56■□□□□ 0.24
CCDC78-216ENST00000544996 LAMTOR5O43504 91 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 SETSIPP0DME0 302 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 RALAP11233 206 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 KRT5P13647 590 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 PRKCSHP14314 528 aaPredicted RBP16.56■□□□□ 0.24
CCDC78-216ENST00000544996 ATP5C1P36542 298 aaKnown RBP16.56■□□□□ 0.24
CCDC78-216ENST00000544996 MFAP3P55082 362 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 ZXDBP98169 803 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 PDE4CQ08493 712 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 GOLGA8FQ08AF8 430 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 GOLGA8DPQ0D2H9 430 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 BST2Q10589 180 aaKnown RBP16.56■□□□□ 0.24
CCDC78-216ENST00000544996 PON2Q15165 354 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 DGKKQ5KSL6 1271 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 TRIM65Q6PJ69 517 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 TXNDC11Q6PKC3 985 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 TTC30AQ86WT1 665 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 ARHGAP18Q8N392 663 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 RBBP8NLQ8NC74 664 aaPredicted RBP16.56■□□□□ 0.24
CCDC78-216ENST00000544996 CDK5RAP1Q96SZ6 601 aaKnown RBP16.56■□□□□ 0.24
CCDC78-216ENST00000544996 LINC00597Q9H2U6 94 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 LRRC4Q9HBW1 653 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 CYLDQ9NQC7 956 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 TBC1D14Q9P2M4 693 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 SH3BP1Q9Y3L3 701 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 COL4A3Q01955 1670 aa16.56■□□□□ 0.24
CCDC78-216ENST00000544996 GREB1Q4ZG55 1949 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms