RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 UBQLN1Q9UMX0 589 aaKnown RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 TCRBV7S2A1N4TA0A589 114 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 DFFAO00273 331 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 TRPA1O75762 1119 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ZNF286BP0CG31 522 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ALADP13716 330 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 INPP1P49441 399 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 TAF6P49848 677 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 STX1BP61266 288 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 TSPY1Q01534 308 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 MTM1Q13496 603 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 GPR162Q16538 588 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 TEDDM1Q5T9Z0 273 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ACOT1Q86TX2 421 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 DAW1Q8N136 415 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ACTL9Q8TC94 416 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 CCDC138Q96M89 665 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ANKRD27Q96NW4 1050 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 FAM167BQ9BTA0 163 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 KATNAL1Q9BW62 490 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 MYLK2Q9H1R3 596 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 MRPL40Q9NQ50 206 aaKnown RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 BFARQ9NZS9 450 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 HAO1Q9UJM8 370 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 PFDN6O15212 129 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ZSCAN5DPP0CG00 497 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 PYGBP11216 843 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 CETPP11597 493 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ADSSP30520 456 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 NDST1P52848 882 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ELF3P78545 371 aaPredicted RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 ART3Q13508 389 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 MTHFD1LQ6UB35 978 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 RGS9BPQ6ZS82 235 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ZDHHC17Q8IUH5 632 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 CATSPER1Q8NEC5 780 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 PPHLN1Q8NEY8 458 aaKnown RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 OR5B17Q8NGF7 314 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 LZICQ8WZA0 190 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 APOPT1Q96IL0 206 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 PARK7Q99497 189 aaKnown RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 P2RX7Q99572 595 aaKnown RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 EPAS1Q99814 870 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 TMEM120AQ9BXJ8 343 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 GPR88Q9GZN0 384 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 MTFR1LQ9H019 292 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 SMYD3Q9H7B4 428 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 GRHL1Q9NZI5 618 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ARHGAP28Q9P2N2 729 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 TSPAN16Q9UKR8 245 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 FIS1Q9Y3D6 152 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 STARD13Q9Y3M8 1113 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 MAFBQ9Y5Q3 323 aaPredicted RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 APOC4-APOC2K7ER74 178 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ONECUT3O60422 494 aaPredicted RBP6□□□□□ -1.45
VPS50-220ENST00000544910 FARP2O94887 1054 aaPredicted RBP6□□□□□ -1.45
VPS50-220ENST00000544910 TRUB2O95900 331 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 APOC2P02655 101 aa6□□□□□ -1.45
VPS50-220ENST00000544910 GSTA2P09210 222 aa6□□□□□ -1.45
VPS50-220ENST00000544910 CYP2F1P24903 491 aa6□□□□□ -1.45
VPS50-220ENST00000544910 OVGP1Q12889 678 aa6□□□□□ -1.45
VPS50-220ENST00000544910 VGLL4Q14135 290 aa6□□□□□ -1.45
VPS50-220ENST00000544910 SMAD1Q15797 465 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 FAXCQ5TGI0 409 aa6□□□□□ -1.45
VPS50-220ENST00000544910 RNF43Q68DV7 783 aa6□□□□□ -1.45
VPS50-220ENST00000544910 MFSD5Q6N075 450 aa6□□□□□ -1.45
VPS50-220ENST00000544910 PRUNE1Q86TP1 453 aa6□□□□□ -1.45
VPS50-220ENST00000544910 EXOC3L1Q86VI1 746 aa6□□□□□ -1.45
VPS50-220ENST00000544910 SLC26A11Q86WA9 606 aa6□□□□□ -1.45
VPS50-220ENST00000544910 NT5DC4Q86YG4 428 aa6□□□□□ -1.45
VPS50-220ENST00000544910 GPC2Q8N158 579 aa6□□□□□ -1.45
VPS50-220ENST00000544910 LRRC43Q8N309 656 aa6□□□□□ -1.45
VPS50-220ENST00000544910 CCDC124Q96CT7 223 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 TMEM109Q9BVC6 243 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ASB7Q9H672 318 aa6□□□□□ -1.45
VPS50-220ENST00000544910 NDE1Q9NXR1 346 aa6□□□□□ -1.45
VPS50-220ENST00000544910 TOMM70O94826 608 aa6□□□□□ -1.45
VPS50-220ENST00000544910 POLBP06746 335 aa6□□□□□ -1.45
VPS50-220ENST00000544910 CNTFP26441 200 aa6□□□□□ -1.45
VPS50-220ENST00000544910 RPA3P35244 121 aaPredicted RBP6□□□□□ -1.45
VPS50-220ENST00000544910 ARL2P36404 184 aa6□□□□□ -1.45
VPS50-220ENST00000544910 NEK2P51955 445 aa6□□□□□ -1.45
VPS50-220ENST00000544910 BCAT1P54687 386 aa6□□□□□ -1.45
VPS50-220ENST00000544910 BST2Q10589 180 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 GRAMD1BQ3KR37 738 aa6□□□□□ -1.45
VPS50-220ENST00000544910 PLEKHA7Q6IQ23 1121 aa6□□□□□ -1.45
VPS50-220ENST00000544910 PLPPR4Q7Z2D5 763 aa6□□□□□ -1.45
VPS50-220ENST00000544910 BBS5Q8N3I7 341 aa6□□□□□ -1.45
VPS50-220ENST00000544910 TRAPPC12Q8WVT3 735 aa6□□□□□ -1.45
VPS50-220ENST00000544910 TRIM15Q9C019 465 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ZDHHC18Q9NUE0 388 aa6□□□□□ -1.45
VPS50-220ENST00000544910 GRID1Q9ULK0 1009 aa6□□□□□ -1.45
VPS50-220ENST00000544910 TNFSF13BQ9Y275 285 aa6□□□□□ -1.45
VPS50-220ENST00000544910 RIPK3Q9Y572 518 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ORC6Q9Y5N6 252 aa6□□□□□ -1.45
VPS50-220ENST00000544910 DCDC2CA8MYV0 355 aa6□□□□□ -1.45
VPS50-220ENST00000544910 DHX15O43143 795 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 ARHGEF9O43307 516 aa6□□□□□ -1.45
VPS50-220ENST00000544910 GPC4O75487 556 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ESRRBO95718 433 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms