RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 RIMBP3CA6NJZ7 1639 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 RIMBP3BA6NNM3 1639 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 NFIL3Q16649 462 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 DENND1BQ6P3S1 775 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 SLC5A5Q92911 643 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 CELF6Q96J87 481 aaKnown RBP13.25□□□□□ -0.29
CHD4-211ENST00000544484 FUT8Q9BYC5 575 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 ASCC2Q9H1I8 757 aaPredicted RBP13.25□□□□□ -0.29
CHD4-211ENST00000544484 RIMBP3Q9UFD9 1639 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 PNMA8BQ9ULN7 279 aaPredicted RBP13.25□□□□□ -0.29
CHD4-211ENST00000544484 SDR42E2A6NKP2 422 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 GLI1P08151 1106 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 TARSP26639 723 aaKnown RBP13.25□□□□□ -0.29
CHD4-211ENST00000544484 PPATQ06203 517 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 ZSCAN5CA6NGD5 496 aaPredicted RBP13.25□□□□□ -0.29
CHD4-211ENST00000544484 DCDC2CA8MYV0 355 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 F9P00740 461 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 MZF1P28698 734 aaPredicted RBP13.25□□□□□ -0.29
CHD4-211ENST00000544484 ADORA2AP29274 412 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 REPS2Q8NFH8 660 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 TRMT6Q9UJA5 497 aaKnown RBP13.25□□□□□ -0.29
CHD4-211ENST00000544484 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHD4-211ENST00000544484 GHRP10912 638 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 WEE1P30291 646 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 DMC1Q14565 340 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 MTFR1Q15390 333 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 VGLL2Q8N8G2 317 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 FRMD8Q9BZ67 464 aaPredicted RBP13.25□□□□□ -0.29
CHD4-211ENST00000544484 UNKQ9C0B0 810 aaKnown RBP13.25□□□□□ -0.29
CHD4-211ENST00000544484 RUVBL2Q9Y230 463 aaKnown RBP13.25□□□□□ -0.29
CHD4-211ENST00000544484 CNTNAP2Q9UHC6 1331 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 CLASP2O75122 1294 aaKnown RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 GJB6O95452 261 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 ARHGAP15Q53QZ3 475 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 C16orf89Q6UX73 402 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 OR9Q1Q8NGQ5 310 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 ACTRT1Q8TDG2 376 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 IDI2Q9BXS1 227 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 NMRK2Q9NPI5 230 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 PIH1D1Q9NWS0 290 aaKnown RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 WWOXQ9NZC7 414 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 PHTF1Q9UMS5 762 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 FAM32AQ9Y421 112 aaKnown RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 C2orf81A6NN90 581 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 TTLL13PA6NNM8 815 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 TGFB3P10600 412 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 SARSP49591 514 aaKnown RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 TMEM119Q4V9L6 283 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 PRUNE1Q86TP1 453 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 MCOLN2Q8IZK6 566 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 TBC1D19Q8N5T2 526 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 GLIS3Q8NEA6 775 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 EXD1Q8NHP7 514 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 SLC35C1Q96A29 364 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 CDCA5Q96FF9 252 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 RRAGCQ9HB90 399 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 ARHGAP26Q9UNA1 814 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 COL5A2P05997 1499 aaPredicted RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 CCDC85BQ15834 202 aaPredicted RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 MRPS31Q92665 395 aaKnown RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 PGLYRP2Q96PD5 576 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 C17orf80Q9BSJ5 609 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 A1CFQ9NQ94 594 aaKnown RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 RARGP13631 454 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 BST2Q10589 180 aaKnown RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 POLD3Q15054 466 aaPredicted RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 DDI1Q8WTU0 396 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 CYGBQ8WWM9 190 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 FICDQ9BVA6 458 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 NEUROG2Q9H2A3 272 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 NT5MQ9NPB1 228 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 COL3A1P02461 1466 aaPredicted RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 GTPBP10A4D1E9 387 aaKnown RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 PRLRP16471 622 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 KCNK10P57789 538 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 BMPR2Q13873 1038 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 MRNIPQ6NTE8 343 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 PCSK9Q8NBP7 692 aaKnown RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 ADAM32Q8TC27 787 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 YME1L1Q96TA2 773 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 PAFAH2Q99487 392 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 INTS13Q9NVM9 706 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 AAR2Q9Y312 384 aaKnown RBP13.24□□□□□ -0.29
CHD4-211ENST00000544484 PPP2R3BQ9Y5P8 575 aa13.24□□□□□ -0.29
CHD4-211ENST00000544484 H7C4K7 107 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 FBXL16Q8N461 479 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 OTUB1Q96FW1 271 aaPredicted RBP13.23□□□□□ -0.29
CHD4-211ENST00000544484 NSL1Q96IY1 281 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 PURBQ96QR8 312 aaKnown RBP13.23□□□□□ -0.29
CHD4-211ENST00000544484 CYP3A43Q9HB55 503 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 TPST1O60507 370 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 CYP2F1P24903 491 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 SOAT1P35610 550 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 ADCYAP1R1P41586 468 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 LHX1P48742 406 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 WDR93Q6P2C0 686 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 FAM162AQ96A26 154 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 SYT15Q9BQS2 421 aa13.23□□□□□ -0.29
CHD4-211ENST00000544484 AAASQ9NRG9 546 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms