RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 MTF2Q9Y483 593 aaPredicted RBP10.87□□□□□ -0.67
NPIPB4-217ENST00000543449 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.87□□□□□ -0.67
NPIPB4-217ENST00000543449 MIA3Q5JRA6 1907 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 LEFTY2O00292 366 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 BIN1O00499 593 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 PAPSS2O95340 614 aaPredicted RBP10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 ZDHHC11BP0C7U3 371 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 RALAP11233 206 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 CD44P16070 742 aaKnown RBP10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 CXCL12P48061 93 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 CACNA2D1P54289 1103 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 CSTF1Q05048 431 aaKnown RBP10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 IFRD2Q12894 506 aaPredicted RBP10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 FZD5Q13467 585 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 CBWD6Q4V339 395 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 CBWD3Q5JTY5 395 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 CBWD5Q5RIA9 395 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 ISM2Q6H9L7 571 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 KLHDC10Q6PID8 442 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 CLEC20AQ6ZU45 233 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 GPIHBP1Q8IV16 184 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 FAM114A1Q8IWE2 563 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 ZNF276Q8N554 614 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 C12orf29Q8N999 325 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 WHAMMQ8TF30 809 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 SEMA4DQ92854 862 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 SECISBP2LQ93073 1101 aaKnown RBP10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 JAKMIP2Q96AA8 810 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 CYP2S1Q96SQ9 504 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 EBF3Q9H4W6 596 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 HPS4Q9NQG7 708 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 FAM86C1Q9NVL1 165 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 HMGXB4Q9UGU5 601 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 SH3BP1Q9Y3L3 701 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 CPQQ9Y646 472 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 PTPRDP23468 1912 aa10.86□□□□□ -0.67
NPIPB4-217ENST00000543449 SHISA7A6NL88 538 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 LRRN2O75325 713 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 ADH1CP00326 375 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 LMNAP02545 664 aaKnown RBP10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 AFPP02771 609 aaKnown RBP10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 PAEPP09466 180 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 VDRP11473 427 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 ACO1P21399 889 aaKnown RBP10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 HOXA6P31267 233 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 CNR2P34972 360 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 ATP5C1P36542 298 aaKnown RBP10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 EIF2DP41214 584 aaKnown RBP10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 BCAT1P54687 386 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 GCNT1Q02742 428 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 TNK2Q07912 1038 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 MTAPQ13126 283 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 PON2Q15165 354 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 TPD52L1Q16890 204 aaPredicted RBP10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 EML3Q32P44 896 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 ZNF394Q53GI3 561 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 SGO2Q562F6 1265 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 TMEM196Q5HYL7 178 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 NUDT18Q6ZVK8 323 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 ENOSF1Q7L5Y1 443 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 CCDC186Q7Z3E2 898 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 TRIM59Q8IWR1 403 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 ANKRD52Q8NB46 1076 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 ZMIZ2Q8NF64 920 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 SCAMP5Q8TAC9 235 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 CD101Q93033 1021 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 ACDQ96AP0 544 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 TWNKQ96RR1 684 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 SLC22A12Q96S37 553 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 P2RY13Q9BPV8 354 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 SRRTQ9BXP5 876 aaKnown RBP10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 CLSTN2Q9H4D0 955 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 CYLDQ9NQC7 956 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 TMEM30AQ9NV96 361 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 CLIC5Q9NZA1 410 aa10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 LSM7Q9UK45 103 aaKnown RBP10.85□□□□□ -0.67
NPIPB4-217ENST00000543449 COL4A2P08572 1712 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 DENND4CQ5VZ89 1909 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 TICRRQ7Z2Z1 1910 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 PRR23AA6NEV1 266 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 COCHO43405 550 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 TLR5O60602 858 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 SETSIPP0DME0 302 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 ARSAP15289 507 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 BMP6P22004 513 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 GJA4P35212 333 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 SOX9P48436 509 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 KIF11P52732 1056 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 RAD23BP54727 409 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 BST2Q10589 180 aaKnown RBP10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 KCNH2Q12809 1159 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 ORC1Q13415 861 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 CCINQ13939 588 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 CAMK4Q16566 473 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 PPP1R26Q5T8A7 1209 aaPredicted RBP10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 BTBD8Q5XKL5 378 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 TRIM68Q6AZZ1 485 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 PPM1KQ8N3J5 372 aa10.84□□□□□ -0.67
NPIPB4-217ENST00000543449 SLC4A11Q8NBS3 891 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms