RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 OTOL1A6NHN0 477 aaPredicted RBP16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 SPECC1L-ADORA2AF8WAN1 911 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 CTHP32929 405 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 MAGEA9P43362 315 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 RPS9P46781 194 aaKnown RBP16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 SOX9P48436 509 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 KPNA1P52294 538 aaPredicted RBP16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 KIF11P52732 1056 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 MTF1Q14872 753 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 PDGFRLQ15198 375 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 C1orf228Q6PIY5 440 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 RALGPS2Q86X27 583 aaPredicted RBP16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 ARHGEF19Q8IW93 802 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 PPM1KQ8N3J5 372 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 OSCP1Q8WVF1 389 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 FAM3CQ92520 227 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 KAT5Q92993 513 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 FAM122AQ96E09 287 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 INTS2Q9H0H0 1204 aaKnown RBP16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 USP3Q9Y6I4 520 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 MYO16Q9Y6X6 1858 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 PIEZO1Q92508 2521 aa16.32■□□□□ 0.2
ECHDC2-223ENST00000542552 CACNA1IQ9P0X4 2223 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 RNF225M0QZC1 329 aaPredicted RBP16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 LEFTY2O00292 366 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 COCHO43405 550 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 ABL1P00519 1130 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 PAEPP09466 180 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 VDRP11473 427 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 ZNF132P52740 706 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 RUNX3Q13761 415 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 HECTD3Q5T447 861 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 TRIM68Q6AZZ1 485 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 CC2D1AQ6P1N0 951 aaPredicted RBP16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 TXNDC11Q6PKC3 985 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 RRAGAQ7L523 313 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 TTC30AQ86WT1 665 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 TTC8Q8TAM2 541 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 JAKMIP2Q96AA8 810 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 CHFRQ96EP1 664 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 ZFRQ96KR1 1074 aaKnown RBP16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 KREMEN1Q96MU8 473 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 IRF2BPLQ9H1B7 796 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 EBF3Q9H4W6 596 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 CNTN6Q9UQ52 1028 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 CPQQ9Y646 472 aa16.31■□□□□ 0.2
ECHDC2-223ENST00000542552 GTPBP10A4D1E9 387 aaKnown RBP16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 H0Y858 1186 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 O00370 1275 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 NCAM2O15394 837 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 ARSAP15289 507 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 ANGPT1Q15389 498 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 EML3Q32P44 896 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 PKDCCQ504Y2 493 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 SGO2Q562F6 1265 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 RAB41Q5JT25 222 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 TMEM270Q6UE05 265 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 CCDC186Q7Z3E2 898 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 CCSER2Q9H7U1 834 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 CYLDQ9NQC7 956 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 TLR8Q9NR97 1041 aaKnown RBP16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 OSER1Q9NX31 292 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 DUS2Q9NX74 493 aaKnown RBP16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 TSPAN16Q9UKR8 245 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 PCDHB4Q9Y5E5 795 aa16.3■□□□□ 0.2
ECHDC2-223ENST00000542552 CYP26A1O43174 497 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 MBD3O95983 291 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 CHRNB1P11230 501 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 TPD52L1Q16890 204 aaPredicted RBP16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 GOLGA7BQ2TAP0 167 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 TRIM65Q6PJ69 517 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 LCLAT1Q6UWP7 414 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 MAMSTRQ6ZN01 415 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 SCD5Q86SK9 330 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 PIGZQ86VD9 579 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 C1orf210Q8IVY1 113 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 FAM114A1Q8IWE2 563 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 MAML2Q8IZL2 1156 aaPredicted RBP16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 ZNF276Q8N554 614 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 TFAP2BQ92481 460 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 ZSWIM1Q9BR11 485 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 CRACR2AQ9BSW2 395 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 LINC00597Q9H2U6 94 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 NMUR1Q9HB89 426 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 NDRG2Q9UN36 371 aaKnown RBP16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 WNT6Q9Y6F9 365 aa16.29■□□□□ 0.2
ECHDC2-223ENST00000542552 FRYLO94915 3013 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 TULP2O00295 520 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 XPO1O14980 1071 aaKnown RBP16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 TLR5O60602 858 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 MBL2P11226 248 aaPredicted RBP16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 CD19P15391 556 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 SLC9A1P19634 815 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 MTIF2P46199 727 aaKnown RBP16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 IFNAR2P48551 515 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 BCAT1P54687 386 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 PDE4CQ08493 712 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 CNGA2Q16280 664 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 MAN2A1Q16706 1144 aa16.28■□□□□ 0.2
ECHDC2-223ENST00000542552 MIIPQ5JXC2 388 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 575.9 ms