RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 TTC19Q6DKK2 380 aaPredicted RBP18.06■□□□□ 0.48
TMEM50B-210ENST00000542230 CLEC20AQ6ZU45 233 aa18.06■□□□□ 0.48
TMEM50B-210ENST00000542230 STK32AQ8WU08 396 aa18.06■□□□□ 0.48
TMEM50B-210ENST00000542230 LINC01599Q8WXQ3 324 aa18.06■□□□□ 0.48
TMEM50B-210ENST00000542230 SNF8Q96H20 258 aa18.06■□□□□ 0.48
TMEM50B-210ENST00000542230 HNRNPABQ99729 332 aaKnown RBP18.06■□□□□ 0.48
TMEM50B-210ENST00000542230 RTP3Q9BQQ7 232 aa18.06■□□□□ 0.48
TMEM50B-210ENST00000542230 DDX23Q9BUQ8 820 aaKnown RBP18.06■□□□□ 0.48
TMEM50B-210ENST00000542230 DUSP16Q9BY84 665 aa18.06■□□□□ 0.48
TMEM50B-210ENST00000542230 LAMA3Q16787 3333 aa18.06■□□□□ 0.48
TMEM50B-210ENST00000542230 DCDC2CA8MYV0 355 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 OPA1O60313 960 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 ATF2P15336 505 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 SDC4P31431 198 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 LMAN1P49257 510 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 CALCOCO2Q13137 446 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 ZNF365Q70YC5 407 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 GPRIN1Q7Z2K8 1008 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 RFX6Q8HWS3 928 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 PXYLP1Q8TE99 480 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 PCED1BQ96HM7 432 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 MED10Q9BTT4 135 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 ADAM7Q9H2U9 754 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 TMPRSS4Q9NRS4 437 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 PTCH2Q9Y6C5 1203 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 PRPSAP2O60256 369 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 IFNB1P01574 187 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 RPL34P49207 117 aaKnown RBP18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 VCPP55072 806 aaKnown RBP18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 ADCY1Q08828 1119 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 DPYSL3Q14195 570 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 P3H1Q32P28 736 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 FAM26DQ5JW98 314 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 HFE2Q6ZVN8 426 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 ECHDC2Q86YB7 292 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 HACE1Q8IYU2 909 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 SLC35B2Q8TB61 432 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 GRK7Q8WTQ7 553 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 TMEM209Q96SK2 561 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 KRT82Q9NSB4 513 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 HOMER3Q9NSC5 361 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 WHRNQ9P202 907 aa18.05■□□□□ 0.48
TMEM50B-210ENST00000542230 ARSEP51690 589 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 BBS12Q6ZW61 710 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 ZNF598Q86UK7 904 aaKnown RBP18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 ZNF280BQ86YH2 543 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 ALLCQ8N6M5 410 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 SYT15Q9BQS2 421 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 PABPC3Q9H361 631 aaKnown RBP18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 HMX1Q9NP08 348 aaPredicted RBP18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 STARD7Q9NQZ5 370 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 NPR3P17342 541 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 GRK4P32298 578 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 SLC26A9Q7LBE3 791 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 CCDC33Q8N5R6 958 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 ZMIZ2Q8NF64 920 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 TBCBQ99426 244 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 SMOQ99835 787 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 C11orf84Q9BUA3 381 aaPredicted RBP18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 SNRNP25Q9BV90 132 aaKnown RBP18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 TRAIPQ9BWF2 469 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 ANAPC5Q9UJX4 755 aa18.04■□□□□ 0.48
TMEM50B-210ENST00000542230 TET1Q8NFU7 2136 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 GOLGA8KD6RF30 607 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 DPYSL4O14531 572 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 NRP1O14786 923 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 XPO1O14980 1071 aaKnown RBP18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 CABYRO75952 493 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 ENDOD1O94919 500 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 ITIH2P19823 946 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 ATP1A2P50993 1020 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 ACAP1Q15027 740 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 IZUMO3Q5VZ72 239 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 CCDC185Q8N715 623 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 FAM149B1Q96BN6 582 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 TMBIM4Q9HC24 238 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 TMLHEQ9NVH6 421 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 BCCIPQ9P287 314 aaKnown RBP eCLIP18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 MTRF1LQ9UGC7 380 aaKnown RBP18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 SYNJ2BP-COX16A0A087WUM0 186 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 SMIM23A6NLE4 172 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 SGK1O00141 431 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 GAD2Q05329 585 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 MTMR3Q13615 1198 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 PPP6R3Q5H9R7 873 aaPredicted RBP18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 SYPL2Q5VXT5 272 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 C1orf228Q6PIY5 440 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 UNC45BQ8IWX7 931 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 DEFB106AQ8N104 65 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 FAM76AQ8TAV0 307 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 NKD2Q969F2 451 aaPredicted RBP18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 EXOC4Q96A65 974 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 COX16Q9P0S2 106 aa18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 FEZ2Q9UHY8 353 aaPredicted RBP18.03■□□□□ 0.48
TMEM50B-210ENST00000542230 TDRD15B5MCY1 1934 aaKnown RBP18.02■□□□□ 0.48
TMEM50B-210ENST00000542230 MOXD2PA6NHM9 499 aa18.02■□□□□ 0.48
TMEM50B-210ENST00000542230 GPS1Q13098 491 aa18.02■□□□□ 0.48
TMEM50B-210ENST00000542230 CLLU1OSQ5K130 101 aa18.02■□□□□ 0.48
TMEM50B-210ENST00000542230 HP1BP3Q5SSJ5 553 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms