RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ASXL3Q9C0F0 2248 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 WDR91A4D1P6 747 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 H0YCG3 227 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 TYROBPO43914 113 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 CIB2O75838 187 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 STAM2O75886 525 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 POLR2BP30876 1174 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 CIITAP33076 1130 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 PGM1P36871 562 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 GCLMP48507 274 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 VAMP7P51809 220 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 CDK16Q00536 496 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 TTLL4Q14679 1199 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 CCNG2Q16589 344 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 EPC2Q52LR7 807 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 SH3D19Q5HYK7 790 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 IZUMO2Q6UXV1 221 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 ZNF720Q7Z2F6 126 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 NANOGNBQ7Z5D8 188 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 IFNLR1Q8IU57 520 aaPredicted RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 SLC9A9Q8IVB4 645 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 ST13P4Q8IZP2 240 aaPredicted RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 SLC25A41Q8N5S1 370 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 RNF139Q8WU17 664 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 NCSTNQ92542 709 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 HIC2Q96JB3 615 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 FAM161BQ96MY7 647 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 HERPUD2Q9BSE4 406 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 HEMGNQ9BXL5 484 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 C12orf65Q9H3J6 166 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 ACAD9Q9H845 621 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 RPF1Q9H9Y2 349 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 LIN28AQ9H9Z2 209 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 SMYD2Q9NRG4 433 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 DDX43Q9NXZ2 648 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 SLC24A2Q9UI40 661 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 CPSF3Q9UKF6 684 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 NEU2Q9Y3R4 380 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 COMMD3-BMI1R4GMX3 469 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 POLR2AP24928 1970 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 LOXHD1Q8IVV2 1947 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 TMEM221A6NGB7 291 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 MSH4O15457 936 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 PLA2G6O60733 806 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 RNASEH1O60930 286 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 LDHAP00338 332 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 RALAP11233 206 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 FGFR1P11362 822 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 ADRA1DP25100 572 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 SERPINB3P29508 390 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 SSTR3P32745 418 aaPredicted RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 SREBF1P36956 1147 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 SLC1A1P43005 524 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 GJA8P48165 433 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 NUMBP49757 651 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 CDK7P50613 346 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 MFAP3P55082 362 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 TGFB2P61812 414 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 DLG4P78352 724 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 SMAD1Q15797 465 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 LIN52Q52LA3 116 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 PLEKHG4Q58EX7 1191 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 PPP6R3Q5H9R7 873 aaPredicted RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 C1orf186Q6ZWK4 172 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 FAM83AQ86UY5 434 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 SLC47A2Q86VL8 602 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 FAM71AQ8IYT1 594 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 AGBL3Q8NEM8 1001 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 SLC16A10Q8TF71 515 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 PDCD6IPQ8WUM4 868 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 FAM118BQ9BPY3 351 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 WDR18Q9BV38 432 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 TMEM120AQ9BXJ8 343 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 OXCT2Q9BYC2 517 aaPredicted RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 SSU72Q9NP77 194 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 MYOZ2Q9NPC6 264 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 NDE1Q9NXR1 346 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 KANSL3Q9P2N6 904 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 WRAP73Q9P2S5 460 aaPredicted RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 HERC5Q9UII4 1024 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 PRR12Q9ULL5 1215 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 TMCO1Q9UM00 188 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 TMA7Q9Y2S6 64 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 MTO1Q9Y2Z2 717 aaKnown RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 SIP14410 1827 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 MYH11P35749 1972 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 A0A1W2PPM1 405 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 DYTNA2CJ06 578 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 FZD9O00144 591 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 DNALI1O14645 258 aaPredicted RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 DNAJC6O75061 913 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 PENKP01210 267 aaPredicted RBP5.44□□□□□ -1.54
PROM1-220ENST00000540805 CYP3A4P08684 503 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 KRT4P19013 534 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 PCSK6P29122 969 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 CPA2P48052 419 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 CD151P48509 253 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 PPP3CAQ08209 521 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 MYBPC2Q14324 1141 aa5.44□□□□□ -1.54
PROM1-220ENST00000540805 KRT72Q14CN4 511 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms