RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 H7C1Q1 480 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 MYO1FO00160 1098 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 PIAS2O75928 621 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 TJP3O95049 919 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 BMP15O95972 392 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 IL1R2P27930 398 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 EPHA3P29320 983 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 UQCRC1P31930 480 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 RPS16P62249 146 aaKnown RBP4.44□□□□□ -1.7
MDM2-227ENST00000540709 SSBP2P81877 361 aaPredicted RBP4.44□□□□□ -1.7
MDM2-227ENST00000540709 SLC29A2Q14542 456 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 RNF220Q5VTB9 566 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 TMEM65Q6PI78 240 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 MICU3Q86XE3 530 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 RAB11FIP4Q86YS3 637 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 KIAA0319LQ8IZA0 1049 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 GALNT16Q8N428 558 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 C11orf44Q8N8P7 122 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 ADAMTS18Q8TE60 1221 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 FCRL4Q96PJ5 515 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 FYTTD1Q96QD9 318 aaKnown RBP4.44□□□□□ -1.7
MDM2-227ENST00000540709 PRSS22Q9GZN4 317 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 VPS16Q9H269 839 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 MGAT4CQ9UBM8 478 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 AFF4Q9UHB7 1163 aaKnown RBP4.44□□□□□ -1.7
MDM2-227ENST00000540709 L1RE1Q9UN81 338 aa4.44□□□□□ -1.7
MDM2-227ENST00000540709 LOC105371045A0A1W2PR82 267 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 TRIM43BA6NCK2 446 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 A6NNZ2 444 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 EXOC5O00471 708 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 DSCR3O14972 297 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 RRP9O43818 475 aaKnown RBP4.43□□□□□ -1.7
MDM2-227ENST00000540709 CHRM5P08912 532 aaPredicted RBP4.43□□□□□ -1.7
MDM2-227ENST00000540709 TPH1P17752 444 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 PTGER1P34995 402 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 GATMP50440 423 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 PLCD1P51178 756 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 PGDP52209 483 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 KRTAP10-11P60412 298 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 FMO1Q01740 532 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 LMAN2Q12907 356 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 ARHGEF7Q14155 803 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 PXDC1Q5TGL8 231 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 C11orf87Q6NUJ2 197 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 PTCHD4Q6ZW05 846 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 BCDIN3DQ7Z5W3 292 aaKnown RBP4.43□□□□□ -1.7
MDM2-227ENST00000540709 C16orf71Q8IYS4 520 aaPredicted RBP4.43□□□□□ -1.7
MDM2-227ENST00000540709 NANOGP1Q8N7R0 232 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 MAGEB6Q8N7X4 407 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 FAM156AQ8NDB6 213 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 SMCR8Q8TEV9 937 aaPredicted RBP4.43□□□□□ -1.7
MDM2-227ENST00000540709 TRIM43Q96BQ3 446 aaPredicted RBP4.43□□□□□ -1.7
MDM2-227ENST00000540709 ZBTB9Q96C00 473 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 SNX15Q9NRS6 342 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 TRNAU1APQ9NX07 287 aaKnown RBP4.43□□□□□ -1.7
MDM2-227ENST00000540709 ELOVL5Q9NYP7 299 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 DNMT3BQ9UBC3 853 aaKnown RBP4.43□□□□□ -1.7
MDM2-227ENST00000540709 SHROOM4Q9ULL8 1493 aa4.43□□□□□ -1.7
MDM2-227ENST00000540709 TCRBV5S1A1TA0A578 114 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 MBD3L4A6NDZ8 208 aaPredicted RBP4.42□□□□□ -1.7
MDM2-227ENST00000540709 MBD3L3A6NE82 208 aaPredicted RBP4.42□□□□□ -1.7
MDM2-227ENST00000540709 VSTM5A8MXK1 200 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 PPEF2O14830 753 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 ADAMTS3O15072 1205 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 CD3EAPO15446 510 aaKnown RBP4.42□□□□□ -1.7
MDM2-227ENST00000540709 MGEA5O60502 916 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 RNF8O76064 485 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 MT-CO3P00414 261 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 IGKV2-30P06310 120 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 SFPQP23246 707 aaKnown RBP eCLIP4.42□□□□□ -1.7
MDM2-227ENST00000540709 KLRC1P26715 233 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 NTSR1P30989 418 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 CACNB3P54284 484 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 NFE2Q16621 373 aaPredicted RBP4.42□□□□□ -1.7
MDM2-227ENST00000540709 Q4G0T1 1027 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 CC2D1BQ5T0F9 858 aaKnown RBP4.42□□□□□ -1.7
MDM2-227ENST00000540709 DENND2CQ68D51 928 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 DARS2Q6PI48 645 aaKnown RBP4.42□□□□□ -1.7
MDM2-227ENST00000540709 SFTPA1Q8IWL2 248 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 MYO1HQ8N1T3 1032 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 LRTOMTQ8WZ04 291 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 RSPRY1Q96DX4 576 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 FAM118BQ9BPY3 351 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 VN1R3Q9BXE9 311 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 LRRC27Q9C0I9 530 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 XPNPEP3Q9NQH7 507 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 TBC1D23Q9NUY8 699 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 ASIC5Q9NY37 505 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 MID2Q9UJV3 735 aa4.42□□□□□ -1.7
MDM2-227ENST00000540709 SCAF8Q9UPN6 1271 aaKnown RBP4.42□□□□□ -1.7
MDM2-227ENST00000540709 SETD1BQ9UPS6 1966 aaKnown RBP4.42□□□□□ -1.7
MDM2-227ENST00000540709 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.41□□□□□ -1.7
MDM2-227ENST00000540709 ISM1B1AKI9 464 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 ADAM10O14672 748 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 TOP3BO95985 862 aaKnown RBP4.41□□□□□ -1.7
MDM2-227ENST00000540709 PHKG2P15735 406 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 DIO1P49895 249 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 TIRAPP58753 221 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 GHRHRQ02643 423 aa4.41□□□□□ -1.7
MDM2-227ENST00000540709 KCNAB1Q14722 419 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms