RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 PTPN9P43378 593 aa15.54■□□□□ 0.08
TSFM-207ENST00000540550 RPL34P49207 117 aaKnown RBP15.54■□□□□ 0.08
TSFM-207ENST00000540550 CCSAPQ6IQ19 270 aaPredicted RBP15.54■□□□□ 0.08
TSFM-207ENST00000540550 MRPL10Q7Z7H8 261 aaKnown RBP15.54■□□□□ 0.08
TSFM-207ENST00000540550 TMEM86AQ8N2M4 240 aa15.54■□□□□ 0.08
TSFM-207ENST00000540550 RNF169Q8NCN4 708 aa15.54■□□□□ 0.08
TSFM-207ENST00000540550 UHMK1Q8TAS1 419 aaKnown RBP15.54■□□□□ 0.08
TSFM-207ENST00000540550 RSAD2Q8WXG1 361 aa15.54■□□□□ 0.08
TSFM-207ENST00000540550 DUSP16Q9BY84 665 aa15.54■□□□□ 0.08
TSFM-207ENST00000540550 SAE1Q9UBE0 346 aaPredicted RBP15.54■□□□□ 0.08
TSFM-207ENST00000540550 SRRDQ9UH36 339 aa15.54■□□□□ 0.08
TSFM-207ENST00000540550 DDX20Q9UHI6 824 aaKnown RBP15.54■□□□□ 0.08
TSFM-207ENST00000540550 TPX2Q9ULW0 747 aaKnown RBP15.54■□□□□ 0.08
TSFM-207ENST00000540550 GRIN2DO15399 1336 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 TLDC2A0PJX2 215 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 ATP2C2O75185 946 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 ZSCAN5DPP0CG00 497 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 ETS1P14921 441 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 IBSPP21815 317 aaPredicted RBP15.53■□□□□ 0.08
TSFM-207ENST00000540550 TKTP29401 623 aaKnown RBP15.53■□□□□ 0.08
TSFM-207ENST00000540550 RPL9P32969 192 aaKnown RBP15.53■□□□□ 0.08
TSFM-207ENST00000540550 LHX1P48742 406 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 SCNN1GP51170 649 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 EIF3EP60228 445 aaKnown RBP15.53■□□□□ 0.08
TSFM-207ENST00000540550 CAP1Q01518 475 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 ITGA7Q13683 1181 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 DPYSL3Q14195 570 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 RAB6CQ53S08 254 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 MDH1BQ5I0G3 518 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 C6orf118Q5T5N4 469 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 EMC10Q5UCC4 262 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 AGMOQ6ZNB7 445 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 CYP4V2Q6ZWL3 525 aaPredicted RBP15.53■□□□□ 0.08
TSFM-207ENST00000540550 ZCCHC9Q8N567 271 aaKnown RBP15.53■□□□□ 0.08
TSFM-207ENST00000540550 GLIS1Q8NBF1 620 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 GSTCDQ8NEC7 633 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 CLEC4CQ8WTT0 213 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 KHSRPQ92945 711 aaKnown RBP eCLIP15.53■□□□□ 0.089e-10■■■■■ 30.6
TSFM-207ENST00000540550 TMEM109Q9BVC6 243 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 RAB6CQ9H0N0 254 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 STMN4Q9H169 189 aaPredicted RBP15.53■□□□□ 0.08
TSFM-207ENST00000540550 DNAJC17Q9NVM6 304 aaKnown RBP15.53■□□□□ 0.08
TSFM-207ENST00000540550 DDX43Q9NXZ2 648 aaKnown RBP15.53■□□□□ 0.08
TSFM-207ENST00000540550 SMIM23A6NLE4 172 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 RGS16O15492 202 aaPredicted RBP15.53■□□□□ 0.08
TSFM-207ENST00000540550 CAND2O75155 1236 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 ENDOD1O94919 500 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 ACSL3O95573 720 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 IRAK1P51617 712 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 CLCNKBP51801 687 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 CDR1P51861 262 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 MMRN1Q13201 1228 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 LPIN1Q14693 890 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 DEFB115Q30KQ5 88 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 EFHC1Q5JVL4 640 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 ARCQ7LC44 396 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 FUKQ8N0W3 1084 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 PGBD4Q96DM1 585 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 PGM2Q96G03 612 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 DDX23Q9BUQ8 820 aaKnown RBP15.53■□□□□ 0.08
TSFM-207ENST00000540550 MIOSQ9NXC5 875 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 CACNG4Q9UBN1 327 aa15.53■□□□□ 0.08
TSFM-207ENST00000540550 CASTOR2A6NHX0 329 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 GABRDO14764 452 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 ZNF623O75123 536 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 TTC4O95801 387 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 SKIP12755 728 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 NPR3P17342 541 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 MAGOHP61326 146 aaKnown RBP15.52■□□□□ 0.07
TSFM-207ENST00000540550 PPP2R2AP63151 447 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 MORF4L2Q15014 288 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 TTC19Q6DKK2 380 aaPredicted RBP15.52■□□□□ 0.07
TSFM-207ENST00000540550 PCGF5Q86SE9 256 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 PIGZQ86VD9 579 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 CD99L2Q8TCZ2 262 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 RAET1EQ8TD07 263 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 SYT15Q9BQS2 421 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 SNRNP25Q9BV90 132 aaKnown RBP15.52■□□□□ 0.07
TSFM-207ENST00000540550 TRMT13Q9NUP7 481 aaKnown RBP15.52■□□□□ 0.07
TSFM-207ENST00000540550 GPATCH2LQ9NWQ4 482 aa15.52■□□□□ 0.07
TSFM-207ENST00000540550 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.52■□□□□ 0.07
TSFM-207ENST00000540550 CLDN5O00501 218 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 RASGRF2O14827 1237 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 MDM4O15151 490 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 EIF3HO15372 352 aaKnown RBP eCLIP15.51■□□□□ 0.07
TSFM-207ENST00000540550 MGEA5O60502 916 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 IVLP07476 585 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 FAM200BP0CF97 657 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 PECAM1P16284 738 aaPredicted RBP15.51■□□□□ 0.07
TSFM-207ENST00000540550 ACLYP53396 1101 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 ROR1Q01973 937 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 ADIGQ0VDE8 80 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 DSC3Q14574 896 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 ZSCAN26Q16670 478 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 FAM26DQ5JW98 314 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 UBAP2Q5T6F2 1119 aaKnown RBP15.51■□□□□ 0.07
TSFM-207ENST00000540550 LRRC31Q6UY01 552 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 SIX6OS1Q8N1H7 587 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 SPATA18Q8TC71 538 aa15.51■□□□□ 0.07
TSFM-207ENST00000540550 EPS8L3Q8TE67 593 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms