RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 PLEKHA4Q9H4M7 779 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 RC3H2Q9HBD1 1191 aaKnown RBP9.28□□□□□ -0.92
DDB1-213ENST00000539332 STIM2Q9P246 746 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 ZNF638Q14966 1978 aaKnown RBP9.28□□□□□ -0.92
DDB1-213ENST00000539332 GREB1Q4ZG55 1949 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 PLXNA3P51805 1871 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 MYO16Q9Y6X6 1858 aa9.28□□□□□ -0.92
DDB1-213ENST00000539332 ZBBXA8MT70 800 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 HMGB1P1B2RPK0 211 aaPredicted RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 TMEM189-UBE2V1I3L0A0 370 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 FSCN2O14926 492 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 HCRTO43612 131 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 FGGP02679 453 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 ALDH2P05091 517 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 PYGMP11217 842 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 LMO2P25791 158 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 OR1G1P47890 313 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 BCAT1P54687 386 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 TAS2R40P59535 323 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 PSMC1P62191 440 aaKnown RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 IFFO1Q0D2I5 559 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 BST2Q10589 180 aaKnown RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 PIGHQ14442 188 aaPredicted RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 ACAP1Q15027 740 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 SIX1Q15475 284 aaPredicted RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 PPP2R5EQ16537 467 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 CYP1B1Q16678 543 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 SEL1L2Q5TEA6 688 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 WSCD1Q658N2 575 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 PHLDB2Q86SQ0 1253 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 TMEM110Q86TL2 294 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 KATNAL2Q8IYT4 538 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 EIF1ADQ8N9N8 165 aaKnown RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 ANKRD52Q8NB46 1076 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 B3GALNT2Q8NCR0 500 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 ZNF689Q96CS4 500 aaPredicted RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 HNRNPABQ99729 332 aaKnown RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 LBHD1Q9BQE6 289 aaPredicted RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 LRRC1Q9BTT6 524 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 SNX25Q9H3E2 840 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 SLITRK6Q9H5Y7 841 aa9.27□□□□□ -0.92
DDB1-213ENST00000539332 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.27□□□□□ -0.92
DDB1-213ENST00000539332 CXXC1Q9P0U4 656 aaPredicted RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 DMGDHQ9UI17 866 aaKnown RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 PRG3Q9Y2Y8 225 aaPredicted RBP9.27□□□□□ -0.92
DDB1-213ENST00000539332 MYO9BQ13459 2157 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 ANKRD65E5RJM6 399 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 M0QZQ0 153 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 NRP1O14786 923 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 GABBR2O75899 941 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 KRT3P12035 628 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 BRCC3P46736 316 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 LHX1P48742 406 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 SLC11A1P49279 550 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 ZNF211Q13398 564 aaPredicted RBP9.27□□□□□ -0.93
DDB1-213ENST00000539332 PREPLQ4J6C6 727 aaPredicted RBP9.27□□□□□ -0.93
DDB1-213ENST00000539332 FBXW10Q5XX13 1052 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 C8orf74Q6P047 294 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 OLFML1Q6UWY5 402 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 DSTYKQ6XUX3 929 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 ARCQ7LC44 396 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 POLNQ7Z5Q5 900 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 SLC13A5Q86YT5 568 aaPredicted RBP9.27□□□□□ -0.93
DDB1-213ENST00000539332 RHOT1Q8IXI2 618 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 ZDHHC14Q8IZN3 488 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 TNS4Q8IZW8 715 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 C12orf50Q8NA57 414 aaPredicted RBP9.27□□□□□ -0.93
DDB1-213ENST00000539332 JOSD2Q8TAC2 188 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 UBA3Q8TBC4 463 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 RIN2Q8WYP3 895 aaPredicted RBP9.27□□□□□ -0.93
DDB1-213ENST00000539332 SUSD3Q96L08 255 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 TMEM175Q9BSA9 504 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 PLVAPQ9BX97 442 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 FAM49BQ9NUQ9 324 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 HESX1Q9UBX0 185 aa9.27□□□□□ -0.93
DDB1-213ENST00000539332 TRANK1O15050 2925 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 GBF1Q92538 1859 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 E5RJQ4 531 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 KRIT1O00522 736 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 DPYSL4O14531 572 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 SART1O43290 800 aaKnown RBP9.26□□□□□ -0.93
DDB1-213ENST00000539332 RAD51CO43502 376 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 TADA2AO75478 443 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 GJB5O95377 273 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 GALTP07902 379 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 ODC1P11926 461 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 TKTP29401 623 aaKnown RBP9.26□□□□□ -0.93
DDB1-213ENST00000539332 PTPN7P35236 360 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 RFC1P35251 1148 aaPredicted RBP9.26□□□□□ -0.93
DDB1-213ENST00000539332 PBX3P40426 434 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 ALDH7A1P49419 539 aaKnown RBP9.26□□□□□ -0.93
DDB1-213ENST00000539332 BCAR1P56945 870 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 ACTN3Q08043 901 aaPredicted RBP9.26□□□□□ -0.93
DDB1-213ENST00000539332 KIAA0319Q5VV43 1072 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 AADACL2Q6P093 401 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 PMF1Q6P1K2 205 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 DCUN1D2Q6PH85 259 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 FAM183BPQ6ZVS7 135 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 PAQR9Q6ZVX9 377 aa9.26□□□□□ -0.93
DDB1-213ENST00000539332 ZDHHC17Q8IUH5 632 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms