RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 GALNT15Q8N3T1 639 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 KIAA1958Q8N8K9 716 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 RHBDD1Q8TEB9 315 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 IPO4Q8TEX9 1081 aaKnown RBP11.91□□□□□ -0.5
CLPB-208ENST00000538021 FOXJ1Q92949 421 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 KCNN1Q92952 543 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 KIF2CQ99661 725 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 REEP2Q9BRK0 252 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 SLC6A17Q9H1V8 727 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 GAREM1Q9H706 876 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 TM7SF3Q9NS93 570 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 TOR4AQ9NXH8 423 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 TBC1D14Q9P2M4 693 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 MAGEC2Q9UBF1 373 aaPredicted RBP11.91□□□□□ -0.5
CLPB-208ENST00000538021 SNX9Q9Y5X1 595 aa11.91□□□□□ -0.5
CLPB-208ENST00000538021 A0A1B0GTW7 788 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 TRIM24O15164 1050 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 ATXN7O15265 892 aaPredicted RBP11.9□□□□□ -0.5
CLPB-208ENST00000538021 TRAK2O60296 914 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 ATP2C2O75185 946 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 CILPO75339 1184 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 CER1O95813 267 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 KRT19P08727 400 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 SCP2P22307 547 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 MAGEA11P43364 429 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 LHX1P48742 406 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 TOB1P50616 345 aaPredicted RBP11.9□□□□□ -0.5
CLPB-208ENST00000538021 PSMC1P62191 440 aaKnown RBP11.9□□□□□ -0.5
CLPB-208ENST00000538021 IFRD2Q12894 506 aaPredicted RBP11.9□□□□□ -0.5
CLPB-208ENST00000538021 EGFLAMQ63HQ2 1017 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 SLFN12LQ6IEE8 588 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 TENM4Q6N022 2769 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 KIAA1324Q6UXG2 1013 aaKnown RBP11.9□□□□□ -0.5
CLPB-208ENST00000538021 DDX42Q86XP3 938 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLPB-208ENST00000538021 ADGRF2Q8IZF7 708 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 ZCCHC9Q8N567 271 aaKnown RBP11.9□□□□□ -0.5
CLPB-208ENST00000538021 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
CLPB-208ENST00000538021 TERB1Q8NA31 727 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 MYLPFQ96A32 169 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 SPATA17Q96L03 361 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 ACOX2Q99424 681 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 CDC6Q99741 560 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 PARVGQ9HBI0 331 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 EHD2Q9NZN4 543 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 HCN2Q9UL51 889 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 ODF2LQ9ULJ1 636 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 FNDC3AQ9Y2H6 1198 aaKnown RBP11.9□□□□□ -0.5
CLPB-208ENST00000538021 RAI2Q9Y5P3 530 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 RAD54BQ9Y620 910 aa11.9□□□□□ -0.5
CLPB-208ENST00000538021 LAD1O00515 517 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 IL18RAPO95256 599 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 OLFM2O95897 454 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 KRT18P05783 430 aaKnown RBP11.89□□□□□ -0.51
CLPB-208ENST00000538021 PLCG1P19174 1290 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 ITPKBP27987 946 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 CD6P30203 668 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 PRPHP41219 470 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 MATKP42679 507 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 PPP3CCP48454 512 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 CYP27A1Q02318 531 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 ST3GAL1Q11201 340 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 CAMK2BQ13554 666 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 HYIQ5T013 277 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 LARP1BQ659C4 914 aaKnown RBP11.89□□□□□ -0.51
CLPB-208ENST00000538021 SCARA3Q6AZY7 606 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 FAM171BQ6P995 826 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 VSTM1Q6UX27 236 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 CRELD2Q6UXH1 353 aaPredicted RBP11.89□□□□□ -0.51
CLPB-208ENST00000538021 GPBP1Q86WP2 473 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 NT5DC4Q86YG4 428 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 ETFBKMTQ8IXQ9 262 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 CSGALNACT2Q8N6G5 542 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 TOP6BLQ8N6T0 577 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 C1orf127Q8N9H9 656 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 FBXO18Q8NFZ0 1043 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 POMGNT1Q8WZA1 660 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 SYT15Q9BQS2 421 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLPB-208ENST00000538021 SH3BP1Q9Y3L3 701 aa11.89□□□□□ -0.51
CLPB-208ENST00000538021 E2F8A0AVK6 867 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 TRIM66O15016 1216 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 FLRT2O43155 660 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 OAS1P00973 400 aaKnown RBP11.88□□□□□ -0.51
CLPB-208ENST00000538021 ZNF883P0CG24 379 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 NCAM1P13591 858 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 GTF2BQ00403 316 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 TAF10Q12962 218 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 HLA-BQ31612 363 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 TDRD10Q5VZ19 366 aaKnown RBP11.88□□□□□ -0.51
CLPB-208ENST00000538021 IL27RAQ6UWB1 636 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 LRRC69Q6ZNQ3 347 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 ZNF843Q8N446 348 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 KCTD17Q8N5Z5 321 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 LRRC52Q8N7C0 313 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 BAHD1Q8TBE0 780 aaPredicted RBP11.88□□□□□ -0.51
CLPB-208ENST00000538021 CACTINQ8WUQ7 758 aaKnown RBP11.88□□□□□ -0.51
CLPB-208ENST00000538021 FAM84AQ96KN4 292 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 MRGPRX1Q96LB2 322 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 FAM213AQ9BRX8 229 aa11.88□□□□□ -0.51
CLPB-208ENST00000538021 GPR174Q9BXC1 333 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms