RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 SLC27A5Q9Y2P5 690 aa12.31□□□□□ -0.44
SPARC-207ENST00000537849 PCDHA3Q9Y5H8 950 aa12.31□□□□□ -0.44
SPARC-207ENST00000537849 MRFAP1Q9Y605 127 aa12.31□□□□□ -0.44
SPARC-207ENST00000537849 DPYSL4O14531 572 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 ZNF185O15231 689 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 SEC24AO95486 1093 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 CXCL14O95715 111 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 ZBED1O96006 694 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 FYNP06241 537 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 GLI1P08151 1106 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 USP17L7P0C7H9 530 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 CPB1P15086 417 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 PDGFRAP16234 1089 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 GPD1P21695 349 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 TAS2R40P59535 323 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 ERVFC1P60507 584 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 ACAP1Q15027 740 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 CCDC14Q49A88 953 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 TPGS2Q68CL5 300 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 HFE2Q6ZVN8 426 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 SPRED2Q7Z698 418 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 CREG2Q8IUH2 290 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 SCN4BQ8IWT1 228 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 ZNF461Q8TAF7 563 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 COG1Q8WTW3 980 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 IRGQQ8WZA9 623 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 CENPIQ92674 756 aaPredicted RBP12.3□□□□□ -0.44
SPARC-207ENST00000537849 KRT35Q92764 455 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 RNPC3Q96LT9 517 aaKnown RBP12.3□□□□□ -0.44
SPARC-207ENST00000537849 C17orf80Q9BSJ5 609 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 CNPY3Q9BT09 278 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 C11orf84Q9BUA3 381 aaPredicted RBP12.3□□□□□ -0.44
SPARC-207ENST00000537849 PLVAPQ9BX97 442 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 MRPL17Q9NRX2 175 aaKnown RBP12.3□□□□□ -0.44
SPARC-207ENST00000537849 ASNSD1Q9NWL6 643 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 AFF4Q9UHB7 1163 aaKnown RBP12.3□□□□□ -0.44
SPARC-207ENST00000537849 LZTS1Q9Y250 596 aa12.3□□□□□ -0.44
SPARC-207ENST00000537849 MTCL1Q9Y4B5 1905 aaKnown RBP12.3□□□□□ -0.44
SPARC-207ENST00000537849 YJEFN3A6XGL0 299 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 MIF4GDA9UHW6 222 aaKnown RBP12.29□□□□□ -0.44
SPARC-207ENST00000537849 E7ENQ6 273 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 C5orf67F2Z3F1 127 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 CES2O00748 559 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 TRIM66O15016 1216 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 URODP06132 367 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 RB1P06400 928 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 TCP1P17987 556 aaKnown RBP12.29□□□□□ -0.44
SPARC-207ENST00000537849 DNAJB1P25685 340 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 PSMA2P25787 234 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 CXCR5P32302 372 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 MARCKSL1P49006 195 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 YWHAZP63104 245 aaKnown RBP12.29□□□□□ -0.44
SPARC-207ENST00000537849 RAB6CQ53S08 254 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 SH3PXD2AQ5TCZ1 1133 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 SDHAF4Q5VUM1 108 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 DAB2IPQ5VWQ8 1189 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 DEFB106AQ8N104 65 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 NUP93Q8N1F7 819 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 SIX6OS1Q8N1H7 587 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 ALG3Q92685 438 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 NT5C3BQ969T7 300 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 PBKQ96KB5 322 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 SPATA17Q96L03 361 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 SLC2A13Q96QE2 648 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 ADAM33Q9BZ11 813 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 RAB6CQ9H0N0 254 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 ALG13Q9NP73 1137 aaKnown RBP12.29□□□□□ -0.44
SPARC-207ENST00000537849 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.29□□□□□ -0.44
SPARC-207ENST00000537849 HSFX1Q9UBD0 423 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 USTQ9Y2C2 406 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 SSX2IPQ9Y2D8 614 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 RWDD3Q9Y3V2 267 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 PCDHA11Q9Y5I1 949 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
SPARC-207ENST00000537849 FAM92AA1XBS5 289 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 CCDC66A2RUB6 948 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 H0YGN5 161 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 PDE2AO00408 941 aaPredicted RBP12.28□□□□□ -0.44
SPARC-207ENST00000537849 KCNK3O14649 394 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
SPARC-207ENST00000537849 TEX28O15482 410 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 SPOPO43791 374 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 HSF2BPO75031 334 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 SOAT2O75908 522 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 ENDOD1O94919 500 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 CNPP09543 421 aaKnown RBP12.28□□□□□ -0.44
SPARC-207ENST00000537849 ATF2P15336 505 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 TCF4P15884 667 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 TFE3P19532 575 aaPredicted RBP12.28□□□□□ -0.44
SPARC-207ENST00000537849 CTNNA1P35221 906 aaKnown RBP12.28□□□□□ -0.44
SPARC-207ENST00000537849 CTNNB1P35222 781 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 NOS2P35228 1153 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 MATKP42679 507 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 PTPN9P43378 593 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 TUFMP49411 452 aaKnown RBP12.28□□□□□ -0.44
SPARC-207ENST00000537849 PGFP49763 221 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 SLC5A3P53794 718 aa12.28□□□□□ -0.44
SPARC-207ENST00000537849 RPL10AP62906 217 aaKnown RBP12.28□□□□□ -0.44
SPARC-207ENST00000537849 C15orf59Q2T9L4 293 aaPredicted RBP12.28□□□□□ -0.44
SPARC-207ENST00000537849 ATP13A4Q4VNC1 1196 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms