RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 WNT16Q9UBV4 365 aa23.97■■□□□ 1.43
SFSWAP-204ENST00000535399 FOXN3O00409 490 aaPredicted RBP23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 CYP26A1O43174 497 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 OLFM2O95897 454 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 CKMP06732 381 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 USP17L7P0C7H9 530 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 SETSIPP0DME0 302 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 USP8P40818 1118 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 PDE6CP51160 858 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 FCHO2Q0JRZ9 810 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 IER5LQ5T953 404 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 RIN3Q8TB24 985 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 BPIFB1Q8TDL5 484 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 RNF38Q9H0F5 515 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 KIF9Q9HAQ2 790 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 FBXL21Q9UKT6 434 aa23.96■■□□□ 1.43
SFSWAP-204ENST00000535399 M0QYV0 167 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 PNMA6AP0CW24 399 aaPredicted RBP23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 RFX1P22670 979 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 GNA15P30679 374 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 GDI1P31150 447 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 PLA2G4AP47712 749 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 DRAP1Q14919 205 aaPredicted RBP23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 SYCP1Q15431 976 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 CCDC186Q7Z3E2 898 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 BMP8AQ7Z5Y6 402 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 LUZP1Q86V48 1076 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 FAM71AQ8IYT1 594 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 SLC35F5Q8WV83 523 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 ZNF606Q8WXB4 792 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 SECISBP2LQ93073 1101 aaKnown RBP23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 TLR8Q9NR97 1041 aaKnown RBP23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 ARHGAP26Q9UNA1 814 aa23.95■■□□□ 1.42
SFSWAP-204ENST00000535399 KRBA1A5PL33 1030 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 ARNTLO00327 626 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 EPHB6O15197 1021 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 CAVIN2O95810 425 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 TUBP50607 506 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 SLC7A9P82251 487 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 PFKPQ01813 784 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 UBXN1Q04323 297 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 RAPGEF1Q13905 1077 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 HECTD3Q5T447 861 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 HFE2Q6ZVN8 426 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 SCD5Q86SK9 330 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 KCTD13Q8WZ19 329 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 ERGIC2Q96RQ1 377 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 LRFN3Q9BTN0 628 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 BRD9Q9H8M2 597 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 NMUR1Q9HB89 426 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 OSER1Q9NX31 292 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 OBSL1O75147 1896 aa23.94■■□□□ 1.42
SFSWAP-204ENST00000535399 DENND4CQ5VZ89 1909 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 PRR33A8MZF0 331 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 ZNF263O14978 683 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 CHADO15335 359 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 COCHO43405 550 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 THAP12O43422 761 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 MED7O43513 233 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 GABBR2O75899 941 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 PDGFBP01127 241 aaPredicted RBP23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 TCF3P15923 654 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 CLCN1P35523 988 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 TKTL1P51854 596 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 ZXDBP98169 803 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 USP4Q13107 963 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 ZNF77Q15935 545 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 MEA1Q16626 185 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 DENND1BQ6P3S1 775 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 YAF2Q8IY57 180 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 SIX5Q8N196 739 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 STK33Q9BYT3 514 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 CCSER2Q9H7U1 834 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 TRPV5Q9NQA5 729 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 FAM207AQ9NSI2 230 aaPredicted RBP23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 CA14Q9ULX7 337 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 PATJQ8NI35 1801 aa23.93■■□□□ 1.42
SFSWAP-204ENST00000535399 A0A1W2PQH9 124 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 GPD2P43304 727 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 SLC44A4Q53GD3 710 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 PM20D1Q6GTS8 502 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 PMF1Q6P1K2 205 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 BHLHA9Q7RTU4 235 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 SH3RF2Q8TEC5 729 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 DNASE1L2Q92874 299 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 IRF7Q92985 503 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 ULBP1Q9BZM6 244 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 LRRC4Q9HBW1 653 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 RTN4Q9NQC3 1192 aaKnown RBP23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 CYLDQ9NQC7 956 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 ARHGEF3Q9NR81 526 aa23.92■■□□□ 1.42
SFSWAP-204ENST00000535399 ZNF638Q14966 1978 aaKnown RBP23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 ANAPC1Q9H1A4 1944 aa23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 TEX33O43247 280 aa23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 TLR5O60602 858 aa23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 RGS7P49802 495 aa23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 POLR2FP61218 127 aaKnown RBP23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 PTK2Q05397 1052 aa23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 ARHGAP29Q52LW3 1261 aa23.91■■□□□ 1.42
SFSWAP-204ENST00000535399 SLC47A2Q86VL8 602 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms