RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 CYP51A1Q16850 503 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 ITIH5Q86UX2 942 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 CCDC60Q8IWA6 550 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 SAMD3Q8N6K7 520 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 PDGFCQ9NRA1 345 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 IARS2Q9NSE4 1012 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 DUX4Q9UBX2 424 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 KPNA6O60684 536 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 TMC7Q7Z402 723 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 ARID3BQ8IVW6 561 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 IL17RAQ96F46 866 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 ZNF711Q9Y462 761 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 CROCC2H7BZ55 1655 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 NDUFB5O43674 189 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 NPTX2P47972 431 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 NUDT2P50583 147 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 COPAP53621 1224 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 PLIN5Q00G26 463 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 MICU2Q8IYU8 434 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 KAT2BQ92831 832 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 VMP1Q96GC9 406 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 CAMKK2Q96RR4 588 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 SLC24A3Q9HC58 644 aa18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 DRG1Q9Y295 367 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 MORC2Q9Y6X9 1032 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-203ENST00000535236 SPATA31A5Q5VU36 1347 aa18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 SPATA31A7Q8IWB4 1347 aa18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 MYL4P12829 197 aa18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 RRM2P31350 389 aa18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 RAP1GAPP47736 663 aa18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 KPNA1P52294 538 aaPredicted RBP18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 DEFA1P59665 94 aa18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 DEFA3P59666 94 aa18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 SLC29A2Q14542 456 aa18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 DMAP1Q9NPF5 467 aaPredicted RBP18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 CPA4Q9UI42 421 aa18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 CD163L1Q9NR16 1453 aa18.77■□□□□ 0.59
SFSWAP-203ENST00000535236 PPP1R3GB7ZBB8 358 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 RNF103O00237 685 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 MAP3K6O95382 1288 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 GRB10Q13322 594 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 TRIP4Q15650 581 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 NT5DC4Q86YG4 428 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 FAM9CQ8IZT9 166 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 FAM111AQ96PZ2 611 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 FICDQ9BVA6 458 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 ADGRE3Q9BY15 652 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 OSGEPL1Q9H4B0 414 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 LRRC40Q9H9A6 602 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 GPATCH2LQ9NWQ4 482 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 SNTNA6NMZ2 147 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 MED24O75448 989 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 ARP10275 920 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 PSMA4P25789 261 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 SLC26A2P50443 739 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 DEFB128Q7Z7B8 93 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 CARD9Q9H257 536 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 PON1P27169 355 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 ELAVL2Q12926 359 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 KCNT1Q5JUK3 1230 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 CCDC81Q6ZN84 652 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 SERPINB12Q96P63 405 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 ZNF518BQ9C0D4 1074 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 FOXN3O00409 490 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 NKRFO15226 690 aaKnown RBP eCLIP18.76■□□□□ 0.591e-6■□□□□ 10.8
SFSWAP-203ENST00000535236 ALDH2P05091 517 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 CPA2P48052 419 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 TGM3Q08188 693 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 PDIA6Q15084 440 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 MOXD1Q6UVY6 613 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 ZIM3Q96PE6 472 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 CBX4O00257 560 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 PCNAP12004 261 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 DNAJB2P25686 324 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 WEE1P30291 646 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 RPS7P62081 194 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 PGS1Q32NB8 556 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 TFDP3Q5H9I0 405 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 CCDC33Q8N5R6 958 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 KRT84Q9NSB2 600 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 TUBGCP4Q9UGJ1 667 aa18.76■□□□□ 0.59
SFSWAP-203ENST00000535236 USP1O94782 785 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 LRRC6Q86X45 466 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 CENPLQ8N0S6 344 aaPredicted RBP18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 FBXO36Q8NEA4 188 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 CCT7Q99832 543 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 CCDC3Q9BQI4 270 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 TMCC3Q9ULS5 477 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 AP4E1Q9UPM8 1137 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 CLTCL1P53675 1640 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 MGAT4DA6NG13 374 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 KCNA3P22001 575 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 ALFQ53S48 1182 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 GTF2A1LQ9UNN4 478 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 FDPSP14324 419 aaKnown RBP18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 CDK5RAP1Q96SZ6 601 aaKnown RBP18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 NUMBP49757 651 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 WDR49Q8IV35 697 aa18.75■□□□□ 0.59
SFSWAP-203ENST00000535236 PDLIM2Q96JY6 352 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms