RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 MOV10L1Q9BXT6 1211 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 TRIM8Q9BZR9 551 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 TRIM7Q9C029 511 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 NACA2Q9H009 215 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 KIAA1683Q9H0B3 1180 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 BRD8Q9H0E9 1235 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 CSRNP2Q9H175 543 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 ADAM7Q9H2U9 754 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 TAF1DQ9H5J8 278 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 IFT122Q9HBG6 1241 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 EPB41L4AQ9HCS5 686 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 PLCB1Q9NQ66 1216 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 TMOD4Q9NZQ9 345 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 KLHL42Q9P2K6 505 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 PRSS50Q9UI38 385 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF180Q9UJW8 692 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 VWA7Q9Y334 891 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 NR2E1Q9Y466 385 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 GPR45Q9Y5Y3 372 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 SAR1BQ9Y6B6 198 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 DUSP10Q9Y6W6 482 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 MROH2AA6NES4 1674 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 DLG5Q8TDM6 1919 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 ANKRD26Q9UPS8 1709 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 BCL9LQ86UU0 1499 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 MROH1Q8NDA8 1641 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 CARMIL3Q8ND23 1372 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ATP7AQ04656 1500 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ARHGAP5Q13017 1502 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 HMGB1P1B2RPK0 211 aaPredicted RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 FFAR3O14843 346 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF263O14978 683 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 NCK2O43639 380 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 AKR1B10O60218 316 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 LUC7L3O95232 432 aaKnown RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 NDUFA10O95299 355 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 BAG3O95817 575 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 RPLP2P05387 115 aaKnown RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 PFKMP08237 780 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 VCAM1P19320 739 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ATP6V1C1P21283 382 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ECHS1P30084 290 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 HPDP32754 393 aaPredicted RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 GPR3P46089 330 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 PLCD1P51178 756 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 STX17P56962 302 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 RAC3P60763 192 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ERVK-21P61565 698 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 KIF23Q02241 960 aaPredicted RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 RNASELQ05823 741 aaKnown RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ITIH3Q06033 890 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 BNIP1Q12981 228 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 DYNC1I2Q13409 638 aaKnown RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 MYBPC2Q14324 1141 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ITIH4Q14624 930 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 RTP5Q14D33 572 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 NOMO1Q15155 1222 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 PCBP2Q15366 365 aaKnown RBP eCLIP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 STILQ15468 1287 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 KCTD19Q17RG1 926 aaPredicted RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 P3H1Q32P28 736 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 VWA3BQ502W6 1294 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 CCDC38Q502W7 563 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 BEND3Q5T5X7 828 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ERMARDQ5T6L9 678 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 AGBL2Q5U5Z8 902 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 SPATA1Q5VX52 437 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 MBNL2Q5VZF2 373 aaKnown RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 TRIM68Q6AZZ1 485 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 OLFML1Q6UWY5 402 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 OLFM4Q6UX06 510 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 LRIG3Q6UXM1 1119 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 CYP26C1Q6V0L0 522 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 USP30Q70CQ3 517 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ASRGL1Q7L266 308 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 LCA5Q86VQ0 697 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF761Q86XN6 746 aaPredicted RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 LRRC34Q8IZ02 419 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 CCDC197Q8NCU1 140 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 GIMAP8Q8ND71 665 aaPredicted RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 SLC17A8Q8NDX2 589 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 SUPT20HQ8NEM7 779 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 C1orf162Q8NEQ5 155 aaPredicted RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 C17orf50Q8WW18 174 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ATXN2LQ8WWM7 1075 aaKnown RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 RUBCNQ92622 972 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 EVI5LQ96CN4 794 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 TLCD1Q96CP7 247 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 CCDC51Q96ER9 411 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 MS4A14Q96JA4 679 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF333Q96JL9 665 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 RPGRIP1Q96KN7 1286 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 LRGUKQ96M69 825 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 AIFM3Q96NN9 605 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 NEK1Q96PY6 1258 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 TRAPPC9Q96Q05 1148 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 AGXT2Q9BYV1 514 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 PUS3Q9BZE2 481 aaKnown RBP3.41□□□□□ -1.86
CSDE1-216ENST00000534389 FAM129AQ9BZQ8 928 aa3.41□□□□□ -1.86
CSDE1-216ENST00000534389 OR10A2Q9H208 303 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms