RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 KIAA1958Q8N8K9 716 aa15.92■□□□□ 0.14
CTSB-230ENST00000534149 MYCBPAPQ8TBZ2 947 aa15.92■□□□□ 0.14
CTSB-230ENST00000534149 C8orf48Q96LL4 319 aa15.92■□□□□ 0.14
CTSB-230ENST00000534149 MMS19Q96T76 1030 aa15.92■□□□□ 0.14
CTSB-230ENST00000534149 MRPL45Q9BRJ2 306 aaKnown RBP15.92■□□□□ 0.14
CTSB-230ENST00000534149 TMEM30AQ9NV96 361 aa15.92■□□□□ 0.14
CTSB-230ENST00000534149 LHX6Q9UPM6 363 aa15.92■□□□□ 0.14
CTSB-230ENST00000534149 NME7Q9Y5B8 376 aa15.92■□□□□ 0.14
CTSB-230ENST00000534149 ANKRD11Q6UB99 2663 aaPredicted RBP15.91■□□□□ 0.14
CTSB-230ENST00000534149 PCDH15Q96QU1 1955 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 A0A0A0MRY4 1105 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.91■□□□□ 0.14
CTSB-230ENST00000534149 DPP6P42658 865 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 TNFRSF4P43489 277 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 FAM193AP78312 1265 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 ALCAMQ13740 583 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 SPDYCQ5MJ68 293 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 TDRD10Q5VZ19 366 aaKnown RBP15.91■□□□□ 0.14
CTSB-230ENST00000534149 LRSAM1Q6UWE0 723 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 DDX42Q86XP3 938 aaKnown RBP eCLIP15.91■□□□□ 0.14
CTSB-230ENST00000534149 CBWD2Q8IUF1 395 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 HDDC3Q8N4P3 179 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 NAT16Q8N8M0 369 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 OR2I1PQ8NGU4 316 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 CLIC6Q96NY7 704 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 SLITRK1Q96PX8 696 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 SLC6A14Q9UN76 642 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 CLIC4Q9Y696 253 aa15.91■□□□□ 0.14
CTSB-230ENST00000534149 NBEAQ8NFP9 2946 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 FRMD3A2A2Y4 597 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 UPK3BL1B0FP48 263 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 UPK3BL2E5RIL1 263 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 AP5Z1O43299 807 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 HOXD12P35452 270 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 RPL6Q02878 288 aaKnown RBP15.9■□□□□ 0.14
CTSB-230ENST00000534149 GFPT1Q06210 699 aaPredicted RBP15.9■□□□□ 0.14
CTSB-230ENST00000534149 DUOXA1Q1HG43 343 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 DUOXA2Q1HG44 320 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 ZNF513Q8N8E2 541 aaPredicted RBP15.9■□□□□ 0.14
CTSB-230ENST00000534149 ZNF518BQ9C0D4 1074 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 SNX25Q9H3E2 840 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 DPEP3Q9H4B8 488 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 PANK4Q9NVE7 773 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 TBC1D14Q9P2M4 693 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 FBXO2Q9UK22 296 aaPredicted RBP15.9■□□□□ 0.14
CTSB-230ENST00000534149 LAMA5O15230 3695 aa15.9■□□□□ 0.14
CTSB-230ENST00000534149 TBC1D3BA6NDS4 549 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 ZNF233A6NK53 670 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 CLDN5O00501 218 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 OPHN1O60890 802 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 GABRG2P18507 467 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 GNL1P36915 607 aaPredicted RBP15.89■□□□□ 0.13
CTSB-230ENST00000534149 TXLNAP40222 546 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 WASP42768 502 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 GAD2Q05329 585 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 C8orf34Q49A92 452 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 ETFBKMTQ8IXQ9 262 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 CHCHD4Q8N4Q1 142 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 MINDY1Q8N5J2 469 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 GLIS3Q8NEA6 775 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 OR6B3Q8NGW1 331 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 CEP76Q8TAP6 659 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 ZFRQ96KR1 1074 aaKnown RBP15.89■□□□□ 0.13
CTSB-230ENST00000534149 ELOVL4Q9GZR5 314 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 CAPN10Q9HC96 672 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 CALCOCO1Q9P1Z2 691 aa15.89■□□□□ 0.13
CTSB-230ENST00000534149 E2F8A0AVK6 867 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 H0Y626 953 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 KIAA0391O15091 583 aaKnown RBP15.88■□□□□ 0.13
CTSB-230ENST00000534149 COCHO43405 550 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 TULP3O75386 442 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 TRIM16O95361 564 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 SERPINF2P08697 491 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 HOXB2P14652 356 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 PTPN1P18031 435 aaKnown RBP15.88■□□□□ 0.13
CTSB-230ENST00000534149 YWHAQP27348 245 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 ZNF33AQ06730 810 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 SURF1Q15526 300 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 C10orf76Q5T2E6 689 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 BTBD8Q5XKL5 378 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 SLC36A4Q6YBV0 504 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 TRAPPC11Q7Z392 1133 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 TRMT11Q7Z4G4 463 aaKnown RBP15.88■□□□□ 0.13
CTSB-230ENST00000534149 MIB1Q86YT6 1006 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 WDR49Q8IV35 697 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 FBXO32Q969P5 355 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 ERLEC1Q96DZ1 483 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 HSPBP1Q9NZL4 362 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 HCN2Q9UL51 889 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 SH3BP1Q9Y3L3 701 aa15.88■□□□□ 0.13
CTSB-230ENST00000534149 SRPRBQ9Y5M8 271 aaKnown RBP15.88■□□□□ 0.13
CTSB-230ENST00000534149 A0A087X0B3 334 aa15.87■□□□□ 0.13
CTSB-230ENST00000534149 IGHV1OR15-9A0A0B4J2B8 117 aa15.87■□□□□ 0.13
CTSB-230ENST00000534149 VPS37CA5D8V6 355 aaPredicted RBP15.87■□□□□ 0.13
CTSB-230ENST00000534149 TAF4O00268 1085 aa15.87■□□□□ 0.13
CTSB-230ENST00000534149 TRIM24O15164 1050 aa15.87■□□□□ 0.13
CTSB-230ENST00000534149 HOXC11O43248 304 aaPredicted RBP15.87■□□□□ 0.13
CTSB-230ENST00000534149 TACC1O75410 805 aa15.87■□□□□ 0.13
CTSB-230ENST00000534149 CST3P01034 146 aaPredicted RBP15.87■□□□□ 0.13
CTSB-230ENST00000534149 DLATP10515 647 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms