RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 NT5DC3Q86UY8 548 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 TTC30AQ86WT1 665 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 PHF13Q86YI8 300 aaPredicted RBP10.04□□□□□ -0.8
RTL1-201ENST00000534062 WDTC1Q8N5D0 677 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 DYDC1Q8WWB3 177 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 KRT35Q92764 455 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 ARMC5Q96C12 935 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 RHOBTB2Q9BYZ6 727 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 HAUS2Q9NVX0 235 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 CYTH4Q9UIA0 394 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 GOLGA6BA6NDN3 693 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 RNF8O76064 485 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 FGGP02679 453 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 FAM200BP0CF97 657 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 BCAT1P54687 386 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 LCLAT1Q6UWP7 414 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 BZW1Q7L1Q6 419 aaKnown RBP10.04□□□□□ -0.8
RTL1-201ENST00000534062 MAGEC3Q8TD91 643 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 CRISPLD2Q9H0B8 497 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 ARHGEF37A1IGU5 675 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 CAPN9O14815 690 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 HOXA2O43364 376 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 BDNFP23560 247 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 BST2Q10589 180 aaKnown RBP10.04□□□□□ -0.8
RTL1-201ENST00000534062 MTA1Q13330 715 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 SMTNL2Q2TAL5 461 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 AADACL2Q6P093 401 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 ZNF365Q70YC5 407 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 NPAS4Q8IUM7 802 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 RSPH1Q8WYR4 309 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 YME1L1Q96TA2 773 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 NENFQ9UMX5 172 aa10.04□□□□□ -0.8
RTL1-201ENST00000534062 BTNL10A8MVZ5 291 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 PI4K2BG5E9Z4 385 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 KRIT1O00522 736 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 B4GALT3O60512 393 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 PDGFRAP16234 1089 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 RFC1P35251 1148 aaPredicted RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 GPD2P43304 727 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 IFT88Q13099 833 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 BTG3Q14201 252 aaPredicted RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 PDCD2Q16342 344 aaPredicted RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 SPATA2LQ8IUW3 424 aaPredicted RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 CCDC105Q8IYK2 499 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 C7orf61Q8IZ16 206 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 TMEM86AQ8N2M4 240 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 TMEM199Q8N511 208 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 LRRC57Q8N9N7 239 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 JOSD2Q8TAC2 188 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 NDRG1Q92597 394 aaKnown RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 RNF25Q96BH1 459 aaPredicted RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 TOX2Q96NM4 488 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 COLEC11Q9BWP8 271 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 HEMGNQ9BXL5 484 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 NME7Q9Y5B8 376 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 NRP1O14786 923 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 ECEL1O95672 775 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 MYZAPP0CAP1 466 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 TKTP29401 623 aaKnown RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 AMPD2Q01433 879 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 ADIGQ0VDE8 80 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 USP4Q13107 963 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 TCTN1Q2MV58 587 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 CTXN3Q4LDR2 81 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 TTMPQ5BVD1 217 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 ARL8AQ96BM9 186 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 UROC1Q96N76 676 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 YIPF3Q9GZM5 350 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 NRDE2Q9H7Z3 1164 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 MTRF1LQ9UGC7 380 aaKnown RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 IP6K2Q9UHH9 426 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 F8VP50 259 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 PDE2AO00408 941 aaPredicted RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 DAPK3O43293 454 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 GRIK1P39086 918 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 MNX1P50219 401 aaPredicted RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 ATP1A2P50993 1020 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 SLC39A12Q504Y0 691 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 CAPRIN2Q6IMN6 1127 aaKnown RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 FAM183BPQ6ZVS7 135 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 PIGZQ86VD9 579 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 TBC1D31Q96DN5 1066 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 PCED1BQ96HM7 432 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 VCPIP1Q96JH7 1222 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 RNPC3Q96LT9 517 aaKnown RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 TRAIPQ9BWF2 469 aa10.03□□□□□ -0.8
RTL1-201ENST00000534062 AVENQ9NQS1 362 aaPredicted RBP10.03□□□□□ -0.8
RTL1-201ENST00000534062 MYO7AQ13402 2215 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.02□□□□□ -0.8
RTL1-201ENST00000534062 PGRMC1O00264 195 aaKnown RBP10.02□□□□□ -0.8
RTL1-201ENST00000534062 WARSP23381 471 aaKnown RBP10.02□□□□□ -0.8
RTL1-201ENST00000534062 DNAJB2P25686 324 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 GPNMBQ14956 572 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 TAF5Q15542 800 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 KCNT1Q5JUK3 1230 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 DNAJC14Q6Y2X3 702 aaPredicted RBP10.02□□□□□ -0.8
RTL1-201ENST00000534062 ANKRD52Q8NB46 1076 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 NSMCE1Q8WV22 266 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 HSPH1Q92598 858 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms