RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 PTPN9P43378 593 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 ZFP36L2P47974 494 aaKnown RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 KCNJ1P48048 391 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 HIRAP54198 1017 aaPredicted RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 GJA9P57773 515 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 ADAM17P78536 824 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 SCAPQ12770 1279 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 LSAMPQ13449 338 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 EFTUD2Q15029 972 aaKnown RBP eCLIP4.11□□□□□ -1.75
ATM-221ENST00000533690 DPYSL2Q16555 572 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 AOC3Q16853 763 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 PTPN20Q4JDL3 420 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 KHDC1Q4VXA5 237 aaKnown RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 MEX3CQ5U5Q3 659 aaKnown RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 ARHGAP17Q68EM7 881 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 LLGL2Q6P1M3 1020 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 CATSPERGQ6ZRH7 1159 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 RNF165Q6ZSG1 346 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 TMEM110Q86TL2 294 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 STKLD1Q8NE28 680 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 MCPH1Q8NEM0 835 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 ATG4AQ8WYN0 398 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 ZNF653Q96CK0 615 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 NAF1Q96HR8 494 aaKnown RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 CFAP57Q96MR6 1250 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 TAAR1Q96RJ0 339 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 HINFPQ9BQA5 517 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 TUBB6Q9BUF5 446 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 ZNF700Q9H0M5 742 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 DCLRE1BQ9H816 532 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 ASNSD1Q9NWL6 643 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 ZFATQ9P243 1243 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 LARSQ9P2J5 1176 aaKnown RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 RCOR3Q9P2K3 495 aaPredicted RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 RIMS3Q9UJD0 308 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 ITGA11Q9UKX5 1188 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 CD2APQ9Y5K6 639 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 EME2A4GXA9 379 aaPredicted RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 DPPA5A6NC42 116 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 SLC15A5A6NIM6 579 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 STK10O94804 968 aaKnown RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 PSMG1O95456 288 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 CALB1P05937 261 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 C8BP07358 591 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 MATR3P43243 847 aaKnown RBP eCLIP4.11□□□□□ -1.75
ATM-221ENST00000533690 PTDSS1P48651 473 aaKnown RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 LIMK1P53667 647 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 SNAP25P60880 206 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 RPL7AP62424 266 aaKnown RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 GALNT2Q10471 571 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 NAA25Q14CX7 972 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 PCLAFQ15004 111 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 KYNUQ16719 465 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 CCDC38Q502W7 563 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 DCAF17Q5H9S7 520 aaPredicted RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 TEDDM1Q5T9Z0 273 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 OR5B17Q8NGF7 314 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 FBXO27Q8NI29 283 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 FAM172AQ8WUF8 416 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 WDR60Q8WVS4 1066 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 ZBTB9Q96C00 473 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 CLMNQ96JQ2 1002 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 NT5C1BQ96P26 610 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 GPR78Q96P69 363 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 RAB3IPQ96QF0 476 aaPredicted RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 ELAC2Q9BQ52 826 aaKnown RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 INO80BQ9C086 356 aaPredicted RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 VEZTQ9HBM0 779 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 GPRC5CQ9NQ84 441 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 TAS2R1Q9NYW7 299 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 KCNG1Q9UIX4 513 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 TRPC5Q9UL62 973 aaPredicted RBP4.11□□□□□ -1.75
ATM-221ENST00000533690 CDH7Q9ULB5 785 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 PHF24Q9UPV7 400 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 RIPK3Q9Y572 518 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 PPP2R3BQ9Y5P8 575 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 DENND4CQ5VZ89 1909 aa4.11□□□□□ -1.75
ATM-221ENST00000533690 G3V2L1 256 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 DLGAP1O14490 977 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 ACOT8O14734 319 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 SERPINA6P08185 405 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 IQCF3P0C7M6 154 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 BRAFP15056 766 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 RPS12P25398 132 aaKnown RBP4.1□□□□□ -1.75
ATM-221ENST00000533690 ACVR2AP27037 513 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 ATICP31939 592 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 ALDH3B2P48448 385 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 GLUD2P49448 558 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 ZNF143P52747 638 aaPredicted RBP4.1□□□□□ -1.75
ATM-221ENST00000533690 MRPS35P82673 323 aaKnown RBP4.1□□□□□ -1.75
ATM-221ENST00000533690 DPYSQ14117 519 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 ADRM1Q16186 407 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 SGO2Q562F6 1265 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 LCLAT1Q6UWP7 414 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 LCA5Q86VQ0 697 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 DHX37Q8IY37 1157 aaKnown RBP4.1□□□□□ -1.75
ATM-221ENST00000533690 CCDC24Q8N4L8 307 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 FBLIM1Q8WUP2 373 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 C1orf54Q8WWF1 131 aa4.1□□□□□ -1.75
ATM-221ENST00000533690 ZNF606Q8WXB4 792 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms