RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 SYT13Q7L8C5 426 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 CACNA2D4Q7Z3S7 1137 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 FILIP1Q7Z7B0 1213 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 FAM35AQ86V20 835 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 GUF1Q8N442 669 aaKnown RBP13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 CCDC150Q8NCX0 1101 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 RPLP0P6Q8NHW5 317 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 SCAMP5Q8TAC9 235 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 GAB3Q8WWW8 586 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 ACDQ96AP0 544 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 CHAMP1Q96JM3 812 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 FBXO44Q9H4M3 255 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 PARD6AQ9NPB6 346 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 SMPD4Q9NXE4 827 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 IL37Q9NZH6 218 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 CFAP97Q9P2B7 532 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 TBC1D14Q9P2M4 693 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 MAPK8IP1Q9UQF2 711 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 E2F8A0AVK6 867 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 TNFRSF10BO14763 440 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 AKAP3O75969 853 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 ADH1CP00326 375 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 HLA-DRAP01903 254 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 PXNP49023 591 aaPredicted RBP13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 TUBP50607 506 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 DHCR24Q15392 516 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 CSRP2Q16527 193 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 NAIF1Q69YI7 327 aaPredicted RBP13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 FAM186BQ8IYM0 893 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 FUKQ8N0W3 1084 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 FAM160A2Q8N612 972 aaPredicted RBP13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 SLC2A14Q8TDB8 520 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 ELMO3Q96BJ8 720 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 OTUB2Q96DC9 234 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 LOXL4Q96JB6 756 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 NACA2Q9H009 215 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 SDCBP2Q9H190 292 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 CYP3A43Q9HB55 503 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 CSNK1G1Q9HCP0 422 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 KRT82Q9NSB4 513 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 SEMA4GQ9NTN9 838 aa13.15□□□□□ -0.3
CAPRIN1-213ENST00000533562 SPAG17Q6Q759 2223 aa13.15□□□□□ -0.31
CAPRIN1-213ENST00000533562 RALGAPA1Q6GYQ0 2036 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 FAM92AA1XBS5 289 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 GOLGA6L4A6NEF3 574 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 AXIN1O15169 862 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 COCHO43405 550 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 APBB3O95704 486 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 CYP17A1P05093 508 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 FAM200BP0CF97 657 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 HOXC13P31276 330 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 GTF2H1P32780 548 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 ASPAP45381 313 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 GCLMP48507 274 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 ATXN1P54253 815 aaKnown RBP13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 MAP3K7CLP57077 242 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 DMC1Q14565 340 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 C1orf220Q5T0J3 134 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 SPOPLQ6IQ16 392 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 C12orf29Q8N999 325 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 RTKNQ9BST9 563 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 NT5C1AQ9BXI3 368 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 TLR8Q9NR97 1041 aaKnown RBP13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 EBF1Q9UH73 591 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 SH3BP1Q9Y3L3 701 aa13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 CNOT1A5YKK6 2376 aaKnown RBP13.14□□□□□ -0.31
CAPRIN1-213ENST00000533562 K7EQS6 105 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 STX10O60499 249 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 ZDHHC11BP0C7U3 371 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 CCDC130P13994 396 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 OPRD1P41143 372 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 EIF2DP41214 584 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 INCA1Q0VD86 236 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 ORC1Q13415 861 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 BECN1Q14457 450 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 EDRF1Q3B7T1 1238 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 PREPLQ4J6C6 727 aaPredicted RBP13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 C2orf27AQ580R0 203 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 RHBDF2Q6PJF5 856 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 PRR23CQ6ZRP0 262 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 NETO1Q8TDF5 533 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 EZH1Q92800 747 aaPredicted RBP13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 CYFIP2Q96F07 1278 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 FAXDC2Q96IV6 333 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 ZC3H10Q96K80 434 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 HHIPQ96QV1 700 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 PNKPQ96T60 521 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 HNRNPABQ99729 332 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 SMOQ99835 787 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 GOLPH3LQ9H4A5 285 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 CCSER2Q9H7U1 834 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 TMEM8AQ9HCN3 771 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 FAM49BQ9NUQ9 324 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 POLR3BQ9NW08 1133 aaPredicted RBP13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 RMND1Q9NWS8 449 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 GMIPQ9P107 970 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 LAMA1P25391 3075 aa13.13□□□□□ -0.31
CAPRIN1-213ENST00000533562 TPRP12270 2363 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms