RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SPATA20Q8TB22 786 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF398Q8TD17 642 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF296Q8WUU4 475 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 PYDC1Q8WXC3 89 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 ARPC5LQ9BPX5 153 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 EIF2AK1Q9BQI3 630 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 TMEM120AQ9BXJ8 343 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 TAGLN3Q9UI15 199 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 USTQ9Y2C2 406 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 F8W8V4 182 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 GOLGA8RI6L899 631 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 GPR25O00155 361 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 C2CD2LO14523 706 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 APOA1P02647 267 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 MYL2P10916 166 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 KCNH2Q12809 1159 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 CDC16Q13042 620 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 PGM5Q15124 567 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 SAMD3Q8N6K7 520 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 C1orf54Q8WWF1 131 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 RNF25Q96BH1 459 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 C18orf8Q96DM3 657 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 RBM15Q96T37 977 aaKnown RBP eCLIP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 SENP6Q9GZR1 1112 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 MROH8Q9H579 483 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 FAM96AQ9H5X1 160 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF302Q9NR11 478 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 FAIMQ9NVQ4 179 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 GCNT4Q9P109 453 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 UVRAGQ9P2Y5 699 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 LNPEPQ9UIQ6 1025 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 NAGPAQ9UK23 515 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 STRIP2Q9ULQ0 834 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 INPP5FQ9Y2H2 1132 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 CAB39Q9Y376 341 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 WASF2Q9Y6W5 498 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 ADAMTS7Q9UKP4 1686 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 PVALEFA0A1B0GWK0 134 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ARHGEF37A1IGU5 675 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF263O14978 683 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 FKTNO75072 461 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 CHEK2O96017 543 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 KRT19P08727 400 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 PLA2G4BP0C869 781 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 GSTT2P0CG29 244 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 GSTT2BP0CG30 244 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 DLATP10515 647 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 FUT4P22083 530 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 NEK3P51956 506 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 PSMC6P62333 389 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 FOLH1Q04609 750 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 PTK2Q05397 1052 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 WASHC5Q12768 1159 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 KLHL38Q2WGJ6 581 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 GALNTL6Q49A17 601 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 LDLRAD1Q5T700 205 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SH3RF1Q7Z6J0 888 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 CLNKQ7Z7G1 428 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 C11orf74Q86VG3 221 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 THNSL1Q8IYQ7 743 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 HPS1Q92902 700 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 MXRA8Q9BRK3 442 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 TRIM9Q9C026 710 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SNX25Q9H3E2 840 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 NOL6Q9H6R4 1146 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 PPCSQ9HAB8 311 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SLCO1B3Q9NPD5 702 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 NRBP2Q9NSY0 501 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SETD4Q9NVD3 440 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 PSMC3IPQ9P2W1 217 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ATRNL1Q5VV63 1379 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SNED1Q8TER0 1413 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 NUP188Q5SRE5 1749 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 MYH2Q9UKX2 1941 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 WDR64B1ANS9 1081 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 H0YGN5 161 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 PFDN6O15212 129 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 MAP3K13O43283 966 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ASNA1O43681 348 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SEC24DO94855 1032 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 KLHL2O95198 593 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ALDH1A1P00352 501 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 PSAPP07602 524 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 GJB1P08034 283 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 FGRP09769 529 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ZBTB48P10074 688 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ACTN1P12814 892 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ITGB5P18084 799 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 TAC1P20366 129 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 COILP38432 576 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 RPL21P46778 160 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 CLCN3P51790 818 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 HP1BP3Q5SSJ5 553 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 NXNQ6DKJ4 435 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ITPRIPL1Q6GPH6 555 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 RFWD3Q6PCD5 774 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 AAGABQ6PD74 315 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SYDE1Q6ZW31 735 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 HEATR4Q86WZ0 1026 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 CATSPER3Q86XQ3 398 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms