RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 STK32AQ8WU08 396 aa23.46■■□□□ 1.35
LRRK1-208ENST00000532029 NOTCH4Q99466 2003 aa23.46■■□□□ 1.35
LRRK1-208ENST00000532029 TASP1Q9H6P5 420 aa23.46■■□□□ 1.35
LRRK1-208ENST00000532029 AIPL1Q9NZN9 384 aa23.46■■□□□ 1.35
LRRK1-208ENST00000532029 GMIPQ9P107 970 aa23.46■■□□□ 1.35
LRRK1-208ENST00000532029 CHORDC1Q9UHD1 332 aaPredicted RBP23.46■■□□□ 1.35
LRRK1-208ENST00000532029 USP3Q9Y6I4 520 aa23.46■■□□□ 1.35
LRRK1-208ENST00000532029 GREB1Q4ZG55 1949 aa23.45■■□□□ 1.35
LRRK1-208ENST00000532029 NCANO14594 1321 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 ZNF840PA6NDX5 716 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 LOC730098B7Z3J9 87 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 ZBED1O96006 694 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 USP17L7P0C7H9 530 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 CASP14P31944 242 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 STXBP5Q5T5C0 1151 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 CCDC186Q7Z3E2 898 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 TMC6Q7Z403 805 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 MON1AQ86VX9 555 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 ZDHHC14Q8IZN3 488 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 C1orf131Q8NDD1 294 aaKnown RBP23.45■■□□□ 1.34
LRRK1-208ENST00000532029 MRFAP1L1Q96HT8 127 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 ULBP1Q9BZM6 244 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 TRPC7Q9HCX4 862 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 CYLDQ9NQC7 956 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 TLR8Q9NR97 1041 aaKnown RBP23.45■■□□□ 1.34
LRRK1-208ENST00000532029 EPS15L1Q9UBC2 864 aa23.45■■□□□ 1.34
LRRK1-208ENST00000532029 SPTBN5Q9NRC6 3674 aaKnown RBP23.44■■□□□ 1.34
LRRK1-208ENST00000532029 DOCK6Q96HP0 2047 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 SOBPA7XYQ1 873 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 PIK3R2O00459 728 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 LSM8O95777 96 aaKnown RBP23.44■■□□□ 1.34
LRRK1-208ENST00000532029 SNX16P57768 344 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 PDCLQ13371 301 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 TXNDC8Q6A555 127 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 TRIM72Q6ZMU5 477 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 IRF2BP2Q7Z5L9 587 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 ARHGAP18Q8N392 663 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 SYN2Q92777 582 aaPredicted RBP23.44■■□□□ 1.34
LRRK1-208ENST00000532029 AGPAT1Q99943 283 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 SLC4A5Q9BY07 1137 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 CNGB3Q9NQW8 809 aa23.44■■□□□ 1.34
LRRK1-208ENST00000532029 SEPT11Q9NVA2 429 aaKnown RBP23.44■■□□□ 1.34
LRRK1-208ENST00000532029 FBXO21O94952 628 aa23.43■■□□□ 1.34
LRRK1-208ENST00000532029 CHRNB2P17787 502 aa23.43■■□□□ 1.34
LRRK1-208ENST00000532029 FMO1Q01740 532 aa23.43■■□□□ 1.34
LRRK1-208ENST00000532029 KLHL30Q0D2K2 578 aa23.43■■□□□ 1.34
LRRK1-208ENST00000532029 WDTC1Q8N5D0 677 aa23.43■■□□□ 1.34
LRRK1-208ENST00000532029 MAB21L3Q8N8X9 362 aa23.43■■□□□ 1.34
LRRK1-208ENST00000532029 ZSCAN18Q8TBC5 510 aaPredicted RBP23.43■■□□□ 1.34
LRRK1-208ENST00000532029 ADAMTS19Q8TE59 1207 aa23.43■■□□□ 1.34
LRRK1-208ENST00000532029 PPP1R13BQ96KQ4 1090 aa23.43■■□□□ 1.34
LRRK1-208ENST00000532029 SYNCQ9H7C4 482 aa23.43■■□□□ 1.34
LRRK1-208ENST00000532029 CYTH4Q9UIA0 394 aa23.43■■□□□ 1.34
LRRK1-208ENST00000532029 TRAV19A0A0A6YYK7 116 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 A0A1W2PQH9 124 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 ZDHHC11BP0C7U3 371 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 PFKLP17858 780 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 CDH5P33151 784 aaPredicted RBP23.42■■□□□ 1.34
LRRK1-208ENST00000532029 AVPR1AP37288 418 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 PRKCIP41743 596 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 RPL34P49207 117 aaKnown RBP23.42■■□□□ 1.34
LRRK1-208ENST00000532029 PSEN1P49768 467 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 SNX30Q5VWJ9 437 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 PM20D1Q6GTS8 502 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 MTSS1LQ765P7 747 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 MSANTD4Q8NCY6 345 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 IPO4Q8TEX9 1081 aaKnown RBP23.42■■□□□ 1.34
LRRK1-208ENST00000532029 SMARCD2Q92925 531 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 ZSWIM3Q96MP5 696 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 SLC46A2Q9BY10 475 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 MIS12Q9H081 205 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 NAGPAQ9UK23 515 aa23.42■■□□□ 1.34
LRRK1-208ENST00000532029 A0A0C4DFX4 3053 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 C2orf78A6NCI8 922 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 C19orf67A6NJJ6 358 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 E5RJQ4 531 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 CKMP06732 381 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 TNFAIP3P21580 790 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 NOMO3P69849 1222 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 TSR1Q2NL82 804 aaKnown RBP23.41■■□□□ 1.34
LRRK1-208ENST00000532029 TDRD12Q587J7 1177 aaKnown RBP23.41■■□□□ 1.34
LRRK1-208ENST00000532029 FAM78AQ5JUQ0 283 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 HECTD3Q5T447 861 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 NAA35Q5VZE5 725 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 E4F1Q66K89 784 aaPredicted RBP23.41■■□□□ 1.34
LRRK1-208ENST00000532029 TMEM110Q86TL2 294 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 CMTM8Q8IZV2 173 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 SCML4Q8N228 414 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 IRGQQ8WZA9 623 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 HAUS4Q9H6D7 363 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 LIMD1Q9UGP4 676 aa23.41■■□□□ 1.34
LRRK1-208ENST00000532029 SART1O43290 800 aaKnown RBP23.4■■□□□ 1.34
LRRK1-208ENST00000532029 GABBR2O75899 941 aa23.4■■□□□ 1.34
LRRK1-208ENST00000532029 CYP1A1P04798 512 aaPredicted RBP23.4■■□□□ 1.34
LRRK1-208ENST00000532029 RALAP11233 206 aa23.4■■□□□ 1.34
LRRK1-208ENST00000532029 HDCP19113 662 aa23.4■■□□□ 1.34
LRRK1-208ENST00000532029 DAOAP59103 153 aa23.4■■□□□ 1.34
LRRK1-208ENST00000532029 YWHAGP61981 247 aaKnown RBP eCLIP23.4■■□□□ 1.34
LRRK1-208ENST00000532029 POTEHQ6S545 545 aa23.4■■□□□ 1.34
LRRK1-208ENST00000532029 SCD5Q86SK9 330 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms