RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 GABRB2P47870 512 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 RPL34P49207 117 aaKnown RBP18.56■□□□□ 0.56
CTSB-222ENST00000531551 PTP4A2Q12974 167 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 KCNC3Q14003 757 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 CCDC85BQ15834 202 aaPredicted RBP18.56■□□□□ 0.56
CTSB-222ENST00000531551 C10orf76Q5T2E6 689 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 KIAA1328Q86T90 577 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 XYLT1Q86Y38 959 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 CTNNBL1Q8WYA6 563 aaPredicted RBP18.56■□□□□ 0.56
CTSB-222ENST00000531551 FBXO32Q969P5 355 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 PSMG2Q969U7 264 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 PIDD1Q9HB75 910 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 CNGB3Q9NQW8 809 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 ZDHHC7Q9NXF8 308 aa18.56■□□□□ 0.56
CTSB-222ENST00000531551 CNOT8Q9UFF9 292 aaKnown RBP18.56■□□□□ 0.56
CTSB-222ENST00000531551 REXO2Q9Y3B8 237 aaKnown RBP18.56■□□□□ 0.56
CTSB-222ENST00000531551 ANKRD62A6NC57 917 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 FOSL2P15408 326 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 TAF10Q12962 218 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 FAM102AQ5T9C2 384 aaPredicted RBP18.55■□□□□ 0.56
CTSB-222ENST00000531551 RTL10Q7L3V2 364 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 PPM1EQ8WY54 764 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 FAM149B1Q96BN6 582 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 TRIM11Q96F44 468 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 VCPIP1Q96JH7 1222 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 CEP295NLQ96MC4 621 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 CORO1BQ9BR76 489 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 SFXN1Q9H9B4 322 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 DZANK1Q9NVP4 752 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 EHD2Q9NZN4 543 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 ASB3Q9Y575 518 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 USP3Q9Y6I4 520 aa18.55■□□□□ 0.56
CTSB-222ENST00000531551 XYLBO75191 536 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 GRAP2O75791 330 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 FBXO21O94952 628 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 ABL1P00519 1130 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 HNRNPA1P09651 372 aaKnown RBP eCLIP18.54■□□□□ 0.56
CTSB-222ENST00000531551 HMGA1P17096 107 aaKnown RBP18.54■□□□□ 0.56
CTSB-222ENST00000531551 RNASE9P60153 205 aaKnown RBP18.54■□□□□ 0.56
CTSB-222ENST00000531551 GPC5P78333 572 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 MRPS5P82675 430 aaKnown RBP18.54■□□□□ 0.56
CTSB-222ENST00000531551 ADAM15Q13444 863 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 RARS2Q5T160 578 aaKnown RBP18.54■□□□□ 0.56
CTSB-222ENST00000531551 PIWIL1Q96J94 861 aaKnown RBP18.54■□□□□ 0.56
CTSB-222ENST00000531551 GUCD1Q96NT3 240 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 SLITRK1Q96PX8 696 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 PRKD2Q9BZL6 878 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 HCFC1R1Q9NWW0 138 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 ADGRG1Q9Y653 693 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 ATG2AQ2TAZ0 1938 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 GJB6O95452 261 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 MYBL1P10243 752 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 HOXA9P31269 272 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 DAOAP59103 153 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 SLC6A3Q01959 620 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 ZNF268Q14587 947 aaPredicted RBP18.54■□□□□ 0.56
CTSB-222ENST00000531551 SKIV2LQ15477 1246 aaKnown RBP18.54■□□□□ 0.56
CTSB-222ENST00000531551 DNAJC24Q6P3W2 148 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 HS6ST3Q8IZP7 471 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 FEZF2Q8TBJ5 459 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 ARHGEF26Q96DR7 871 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 SELENOOQ9BVL4 669 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 GMIPQ9P107 970 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 WDR35Q9P2L0 1181 aa18.54■□□□□ 0.56
CTSB-222ENST00000531551 MYH10P35580 1976 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 PTPRDP23468 1912 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 YJEFN3A6XGL0 299 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 E7ENQ6 273 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 CCDC175P0C221 793 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 TMEM253P0C7T8 217 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 MYL4P12829 197 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 TAF5Q15542 800 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 ANKRD54Q6NXT1 300 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 OLFML1Q6UWY5 402 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 TMEM184AQ6ZMB5 413 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 ZDHHC17Q8IUH5 632 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 SMG7Q92540 1137 aaKnown RBP18.53■□□□□ 0.56
CTSB-222ENST00000531551 GOLGA1Q92805 767 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 ZNF334Q9HCZ1 680 aaPredicted RBP18.53■□□□□ 0.56
CTSB-222ENST00000531551 ASAH2Q9NR71 780 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 METTL5Q9NRN9 209 aaKnown RBP18.53■□□□□ 0.56
CTSB-222ENST00000531551 COMMD8Q9NX08 183 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 PYCARDQ9ULZ3 195 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 SCML2Q9UQR0 700 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 REV3LO60673 3130 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 EYSQ5T1H1 3165 aa18.53■□□□□ 0.56
CTSB-222ENST00000531551 PTPN2P17706 415 aa18.52■□□□□ 0.56
CTSB-222ENST00000531551 DEKP35659 375 aaKnown RBP18.52■□□□□ 0.56
CTSB-222ENST00000531551 VAV2P52735 878 aa18.52■□□□□ 0.56
CTSB-222ENST00000531551 PM20D1Q6GTS8 502 aa18.52■□□□□ 0.56
CTSB-222ENST00000531551 GRASPQ7Z6J2 395 aaPredicted RBP18.52■□□□□ 0.56
CTSB-222ENST00000531551 C3orf20Q8ND61 904 aa18.52■□□□□ 0.56
CTSB-222ENST00000531551 ZNF707Q96C28 371 aaPredicted RBP18.52■□□□□ 0.56
CTSB-222ENST00000531551 MCRS1Q96EZ8 462 aa18.52■□□□□ 0.56
CTSB-222ENST00000531551 TTLL2Q9BWV7 592 aa18.52■□□□□ 0.56
CTSB-222ENST00000531551 PARVAQ9NVD7 372 aa18.52■□□□□ 0.56
CTSB-222ENST00000531551 IL37Q9NZH6 218 aa18.52■□□□□ 0.56
CTSB-222ENST00000531551 CTTNBP2NLQ9P2B4 639 aa18.52■□□□□ 0.56
CTSB-222ENST00000531551 UXTQ9UBK9 157 aaPredicted RBP18.52■□□□□ 0.56
CTSB-222ENST00000531551 PRRC2BQ5JSZ5 2229 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms