RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ZBTB40Q9NUA8 1239 aa5.58□□□□□ -1.52
PTPRK-220ENST00000531466 XRCC6P12956 609 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPRK-220ENST00000531466 YPEL5P62699 121 aa5.57□□□□□ -1.52
PTPRK-220ENST00000531466 PTCHD3Q3KNS1 767 aa5.57□□□□□ -1.52
PTPRK-220ENST00000531466 ZNF585BQ52M93 769 aa5.57□□□□□ -1.52
PTPRK-220ENST00000531466 RANBP10Q6VN20 620 aa5.57□□□□□ -1.52
PTPRK-220ENST00000531466 SLC15A4Q8N697 577 aa5.57□□□□□ -1.52
PTPRK-220ENST00000531466 DNAJC5GQ8N7S2 189 aa5.57□□□□□ -1.52
PTPRK-220ENST00000531466 PPP2R3CQ969Q6 453 aa5.57□□□□□ -1.52
PTPRK-220ENST00000531466 MTFMTQ96DP5 389 aaKnown RBP5.57□□□□□ -1.52
PTPRK-220ENST00000531466 PPP1R10Q96QC0 940 aaKnown RBP5.57□□□□□ -1.52
PTPRK-220ENST00000531466 P2RX7Q99572 595 aaKnown RBP5.57□□□□□ -1.52
PTPRK-220ENST00000531466 MLXIPQ9HAP2 919 aa5.57□□□□□ -1.52
PTPRK-220ENST00000531466 SPC25Q9HBM1 224 aa5.57□□□□□ -1.52
PTPRK-220ENST00000531466 MED16Q9Y2X0 877 aa5.57□□□□□ -1.52
PTPRK-220ENST00000531466 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.57□□□□□ -1.52
PTPRK-220ENST00000531466 IL33O95760 270 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 HYAL1Q12794 435 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 KRTAP27-1Q3LI81 207 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 PLA1AQ53H76 456 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 USP43Q70EL4 1123 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 GAS2L3Q86XJ1 694 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 PLBD2Q8NHP8 589 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 IGFBPL1Q8WX77 278 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 MVB12AQ96EY5 273 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 CDK5RAP3Q96JB5 506 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 MRGPRX1Q96LB2 322 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 HS6ST2Q96MM7 605 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 USP35Q9P2H5 1018 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 STAP2Q9UGK3 403 aa5.56□□□□□ -1.52
PTPRK-220ENST00000531466 DRG1Q9Y295 367 aaKnown RBP5.56□□□□□ -1.52
PTPRK-220ENST00000531466 SNUPNO95149 360 aaKnown RBP5.55□□□□□ -1.52
PTPRK-220ENST00000531466 EVA1CP58658 441 aa5.55□□□□□ -1.52
PTPRK-220ENST00000531466 MTX1Q13505 466 aa5.55□□□□□ -1.52
PTPRK-220ENST00000531466 KCNB1Q14721 858 aa5.55□□□□□ -1.52
PTPRK-220ENST00000531466 CC2D1BQ5T0F9 858 aaKnown RBP5.55□□□□□ -1.52
PTPRK-220ENST00000531466 CERCAMQ5T4B2 595 aa5.55□□□□□ -1.52
PTPRK-220ENST00000531466 LINC01465Q8N7H1 131 aa5.55□□□□□ -1.52
PTPRK-220ENST00000531466 RAPGEF4Q8WZA2 1011 aa5.55□□□□□ -1.52
PTPRK-220ENST00000531466 SNX15Q9NRS6 342 aa5.55□□□□□ -1.52
PTPRK-220ENST00000531466 TTC3P53804 2025 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 ALDH2P05091 517 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 THP07101 528 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 TNFRSF1BP20333 461 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 SLC9C1Q4G0N8 1177 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 EGFLAMQ63HQ2 1017 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 C18orf65Q6ZTR6 163 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 SPARTQ8N0X7 666 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 MMP21Q8N119 569 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 MS4A7Q9GZW8 240 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-220ENST00000531466 SLCO5A1Q9H2Y9 848 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 CNNM1Q9NRU3 951 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 ICKQ9UPZ9 632 aa5.54□□□□□ -1.52
PTPRK-220ENST00000531466 A0A087WWL8 130 aa5.53□□□□□ -1.52
PTPRK-220ENST00000531466 CREB1P16220 341 aa5.53□□□□□ -1.52
PTPRK-220ENST00000531466 ATF7P17544 494 aaPredicted RBP5.53□□□□□ -1.52
PTPRK-220ENST00000531466 CCNIQ14094 377 aa5.53□□□□□ -1.52
PTPRK-220ENST00000531466 VSTM1Q6UX27 236 aa5.53□□□□□ -1.52
PTPRK-220ENST00000531466 ADHFE1Q8IWW8 467 aa5.53□□□□□ -1.52
PTPRK-220ENST00000531466 C16orf71Q8IYS4 520 aaPredicted RBP5.53□□□□□ -1.52
PTPRK-220ENST00000531466 PRPF38AQ8NAV1 312 aaKnown RBP5.53□□□□□ -1.52
PTPRK-220ENST00000531466 DNAJB14Q8TBM8 379 aa5.53□□□□□ -1.52
PTPRK-220ENST00000531466 CTHRC1Q96CG8 243 aa5.53□□□□□ -1.52
PTPRK-220ENST00000531466 ZPBPQ9BS86 351 aa5.53□□□□□ -1.52
PTPRK-220ENST00000531466 STXBP5LQ9Y2K9 1186 aa5.53□□□□□ -1.52
PTPRK-220ENST00000531466 NOTCH4Q99466 2003 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 C4orf47A7E2U8 309 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 LACTBL1A8MY62 500 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 SPRY2O43597 315 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 TGFB3P10600 412 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 CPA2P48052 419 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 BCAT1P54687 386 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 SLC14A1Q13336 389 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 ZNF628Q5EBL2 1059 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 DENND2CQ68D51 928 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 LMBRD2Q68DH5 695 aaPredicted RBP5.52□□□□□ -1.53
PTPRK-220ENST00000531466 ZNF793Q6ZN11 406 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 RAB11FIP4Q86YS3 637 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 DCP1BQ8IZD4 617 aaKnown RBP5.52□□□□□ -1.53
PTPRK-220ENST00000531466 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 CGRRF1Q99675 332 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 USP22Q9UPT9 525 aa5.52□□□□□ -1.53
PTPRK-220ENST00000531466 M0R3H8 397 aa5.51□□□□□ -1.53
PTPRK-220ENST00000531466 STIM1Q13586 685 aa5.51□□□□□ -1.53
PTPRK-220ENST00000531466 ZNF750Q32MQ0 723 aa5.51□□□□□ -1.53
PTPRK-220ENST00000531466 MPP5Q8N3R9 675 aa5.51□□□□□ -1.53
PTPRK-220ENST00000531466 HSPBAP1Q96EW2 488 aa5.51□□□□□ -1.53
PTPRK-220ENST00000531466 PIH1D1Q9NWS0 290 aaKnown RBP5.51□□□□□ -1.53
PTPRK-220ENST00000531466 MDFICQ9P1T7 246 aa5.51□□□□□ -1.53
PTPRK-220ENST00000531466 MGAT4CQ9UBM8 478 aa5.51□□□□□ -1.53
PTPRK-220ENST00000531466 MAFFQ9ULX9 164 aa5.51□□□□□ -1.53
PTPRK-220ENST00000531466 IGLV5-39A0A0G2JS06 123 aa5.5□□□□□ -1.53
PTPRK-220ENST00000531466 TMEM233B4DJY2 109 aa5.5□□□□□ -1.53
PTPRK-220ENST00000531466 PRKAR1BP31321 381 aa5.5□□□□□ -1.53
PTPRK-220ENST00000531466 CTBP1Q13363 440 aa5.5□□□□□ -1.53
PTPRK-220ENST00000531466 MFSD13AQ14CX5 517 aa5.5□□□□□ -1.53
PTPRK-220ENST00000531466 GRAMD1CQ8IYS0 662 aa5.5□□□□□ -1.53
PTPRK-220ENST00000531466 NLRP4Q96MN2 994 aa5.5□□□□□ -1.53
PTPRK-220ENST00000531466 SCNM1Q9BWG6 230 aa5.5□□□□□ -1.53
PTPRK-220ENST00000531466 ASPSCR1Q9BZE9 553 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms