RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 P2RY13Q9BPV8 354 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 THAP9Q9H5L6 903 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 METTL14Q9HCE5 456 aaKnown RBP19.02■□□□□ 0.64
PTPN11-204ENST00000531326 RXFP3Q9NSD7 469 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 DUS2Q9NX74 493 aaKnown RBP19.02■□□□□ 0.64
PTPN11-204ENST00000531326 WNT6Q9Y6F9 365 aa19.02■□□□□ 0.64
PTPN11-204ENST00000531326 CACNA1BQ00975 2339 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 KMT2BQ9UMN6 2715 aaPredicted RBP19.01■□□□□ 0.63
PTPN11-204ENST00000531326 TRAV19A0A0A6YYK7 116 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 EPN2O95208 641 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 VNN1O95497 513 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 CST3P01034 146 aaPredicted RBP19.01■□□□□ 0.63
PTPN11-204ENST00000531326 CKMP06732 381 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 USP17L7P0C7H9 530 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 GTF2H1P32780 548 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 MAGEA11P43364 429 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 GCLMP48507 274 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 PSMC1P62191 440 aaKnown RBP19.01■□□□□ 0.63
PTPN11-204ENST00000531326 AMPD2Q01433 879 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 EML3Q32P44 896 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 DCAF17Q5H9S7 520 aaPredicted RBP19.01■□□□□ 0.63
PTPN11-204ENST00000531326 CACNA2D4Q7Z3S7 1137 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 TRIM59Q8IWR1 403 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 CPA6Q8N4T0 437 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 TTC16Q8NEE8 873 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 SLC35C1Q96A29 364 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 HPDLQ96IR7 371 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 LOXL4Q96JB6 756 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 CNOT6LQ96LI5 555 aaKnown RBP19.01■□□□□ 0.63
PTPN11-204ENST00000531326 HHIPQ96QV1 700 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 SYT15Q9BQS2 421 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 CRTAC1Q9NQ79 661 aa19.01■□□□□ 0.63
PTPN11-204ENST00000531326 FOXD2O60548 495 aaPredicted RBP19■□□□□ 0.63
PTPN11-204ENST00000531326 ZXDBP98169 803 aa19■□□□□ 0.63
PTPN11-204ENST00000531326 BIRC3Q13489 604 aa19■□□□□ 0.63
PTPN11-204ENST00000531326 TPD52L1Q16890 204 aaPredicted RBP19■□□□□ 0.63
PTPN11-204ENST00000531326 DPH6Q7L8W6 267 aa19■□□□□ 0.63
PTPN11-204ENST00000531326 CAMKK1Q8N5S9 505 aa19■□□□□ 0.63
PTPN11-204ENST00000531326 RPLP0P6Q8NHW5 317 aa19■□□□□ 0.63
PTPN11-204ENST00000531326 SH3RF2Q8TEC5 729 aa19■□□□□ 0.63
PTPN11-204ENST00000531326 MYLPFQ96A32 169 aa19■□□□□ 0.63
PTPN11-204ENST00000531326 LINC00597Q9H2U6 94 aa19■□□□□ 0.63
PTPN11-204ENST00000531326 TMEM8AQ9HCN3 771 aa19■□□□□ 0.63
PTPN11-204ENST00000531326 SAMSN1Q9NSI8 373 aaKnown RBP19■□□□□ 0.63
PTPN11-204ENST00000531326 NFE2L3Q9Y4A8 694 aa19■□□□□ 0.63
PTPN11-204ENST00000531326 ZNF806P0C7X5 589 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 BDNFP23560 247 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 IFNAR2P48551 515 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 MYL6P60660 151 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 USP46P62068 366 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 MYO1EQ12965 1108 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 NCAPHQ15003 741 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 FBXO43Q4G163 708 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 AASDHQ4L235 1098 aaPredicted RBP18.99■□□□□ 0.63
PTPN11-204ENST00000531326 PLA2G2CQ5R387 149 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 TCERG1LQ5VWI1 586 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 CD101Q93033 1021 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 ATP2A3Q93084 1043 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 ZC3H10Q96K80 434 aaKnown RBP18.99■□□□□ 0.63
PTPN11-204ENST00000531326 BPIFA3Q9BQP9 254 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 XYLT2Q9H1B5 865 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 SMOC1Q9H4F8 434 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 MMRN2Q9H8L6 949 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 MAGEC2Q9UBF1 373 aaPredicted RBP18.99■□□□□ 0.63
PTPN11-204ENST00000531326 CDH9Q9ULB4 789 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 NME7Q9Y5B8 376 aa18.99■□□□□ 0.63
PTPN11-204ENST00000531326 TM4SF5O14894 197 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 STX10O60499 249 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 PHACTR2O75167 634 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 PDGFRBP09619 1106 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 TCF3P15923 654 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 WARSP23381 471 aaKnown RBP18.98■□□□□ 0.63
PTPN11-204ENST00000531326 MXI1P50539 228 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 LIMK1P53667 647 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 MYL5Q02045 173 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 NCOA4Q13772 614 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 CBWD6Q4V339 395 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 CBWD3Q5JTY5 395 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 CBWD5Q5RIA9 395 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 KRT39Q6A163 491 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 C4orf50Q6ZRC1 276 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 SYT13Q7L8C5 426 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 TAS1R2Q8TE23 839 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 SPATA17Q96L03 361 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 ARHGAP26Q9UNA1 814 aa18.98■□□□□ 0.63
PTPN11-204ENST00000531326 CNOT1A5YKK6 2376 aaKnown RBP18.98■□□□□ 0.63
PTPN11-204ENST00000531326 ANTXRLA6NF34 631 aa18.97■□□□□ 0.63
PTPN11-204ENST00000531326 KRT37O76014 449 aa18.97■□□□□ 0.63
PTPN11-204ENST00000531326 STAU1O95793 577 aaKnown RBP18.97■□□□□ 0.63
PTPN11-204ENST00000531326 HLA-DRAP01903 254 aa18.97■□□□□ 0.63
PTPN11-204ENST00000531326 HDCP19113 662 aa18.97■□□□□ 0.63
PTPN11-204ENST00000531326 TRPC3Q13507 836 aa18.97■□□□□ 0.63
PTPN11-204ENST00000531326 DMC1Q14565 340 aa18.97■□□□□ 0.63
PTPN11-204ENST00000531326 PLK5Q496M5 336 aa18.97■□□□□ 0.63
PTPN11-204ENST00000531326 HSP90AA4PQ58FG1 418 aa18.97■□□□□ 0.63
PTPN11-204ENST00000531326 CDKAL1Q5VV42 579 aa18.97■□□□□ 0.63
PTPN11-204ENST00000531326 VSTM1Q6UX27 236 aa18.97■□□□□ 0.63
PTPN11-204ENST00000531326 C12orf50Q8NA57 414 aaPredicted RBP18.97■□□□□ 0.63
PTPN11-204ENST00000531326 PCED1BQ96HM7 432 aa18.97■□□□□ 0.63
PTPN11-204ENST00000531326 NAT10Q9H0A0 1025 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms