RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 NUP93Q8N1F7 819 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 PGBD3Q8N328 593 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 HMGB4Q8WW32 186 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 PIGKQ92643 395 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 C7orf25Q9BPX7 421 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 LSM14BQ9BX40 385 aaKnown RBP16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 POLMQ9NP87 494 aaPredicted RBP16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 DMAP1Q9NPF5 467 aaPredicted RBP16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 TMEM30AQ9NV96 361 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 TBC1D14Q9P2M4 693 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 GREB1Q4ZG55 1949 aa16.8■□□□□ 0.28
CHMP4A-204ENST00000530996 TCRBV21S2A2A0A5A6 115 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 COCHO43405 550 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 EIF2DP41214 584 aaKnown RBP16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 ZNF252P-AS1Q0IIN9 211 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 GAB4Q2WGN9 574 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 EOGTQ5NDL2 527 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 RASSF3Q86WH2 238 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 CEP57L1Q8IYX8 460 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 IL17RCQ8NAC3 791 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 RLN3Q8WXF3 142 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 SMARCD1Q96GM5 515 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 TNIP3Q96KP6 325 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 ZDHHC4Q9NPG8 344 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 TMEM9BQ9NQ34 198 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 EXOC1Q9NV70 894 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 GMIPQ9P107 970 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 RALGAPA1Q6GYQ0 2036 aa16.79■□□□□ 0.28
CHMP4A-204ENST00000530996 SDK1Q7Z5N4 2213 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 HELZP42694 1942 aaKnown RBP16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 PATE3B3GLJ2 98 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 SGK1O00141 431 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 TM4SF5O14894 197 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 AP1G2O75843 785 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 STAU1O95793 577 aaKnown RBP16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 GRIA2P42262 883 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 MESP2Q0VG99 397 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 ORC1Q13415 861 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 NCOA4Q13772 614 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 KNOP1Q1ED39 458 aaKnown RBP16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 ANO4Q32M45 955 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 UAP1L1Q3KQV9 507 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 LY6G5CQ5SRR4 150 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 HECTD3Q5T447 861 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 CNNM4Q6P4Q7 775 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 TMEM92Q6UXU6 159 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 LPCAT2Q7L5N7 544 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 GRAMD1CQ8IYS0 662 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 ADGRG2Q8IZP9 1017 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 KIAA1958Q8N8K9 716 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 SCAMP5Q8TAC9 235 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 GOLGA5Q8TBA6 731 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 OVCA2Q8WZ82 227 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 ELMO3Q96BJ8 720 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 KCNK16Q96T55 309 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 XYLT2Q9H1B5 865 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 CCSER2Q9H7U1 834 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 CGNQ9P2M7 1197 aaKnown RBP16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 CHD8Q9HCK8 2581 aa16.78■□□□□ 0.28
CHMP4A-204ENST00000530996 ATXN2Q99700 1313 aaKnown RBP16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 E2F8A0AVK6 867 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 TBC1D3BA6NDS4 549 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 LRRIQ3A6PVS8 624 aaPredicted RBP16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 FAM163BP0C2L3 166 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 P4HA1P13674 534 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 TRIM21P19474 475 aaKnown RBP16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 CDH8P55286 799 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 GAD2Q05329 585 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 CUL4BQ13620 913 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 BMT2Q1RMZ1 405 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 HSF5Q4G112 596 aaPredicted RBP16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 C10orf76Q5T2E6 689 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 SH3PXD2AQ5TCZ1 1133 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 RHBDF2Q6PJF5 856 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 NAT16Q8N8M0 369 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 ZNF516Q92618 1163 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 JAKMIP2Q96AA8 810 aa16.77■□□□□ 0.28
CHMP4A-204ENST00000530996 SPAG17Q6Q759 2223 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 CCDC130P13994 396 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 HNRNPLP14866 589 aaKnown RBP eCLIP16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 PIK3CAP42336 1068 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 MAPK8P45983 427 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 AP3M2P53677 418 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 SHC2P98077 582 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 FOXC1Q12948 553 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 PREPLQ4J6C6 727 aaPredicted RBP16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 TRIM61Q5EBN2 209 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 EMC10Q5UCC4 262 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 ACOT1Q86TX2 421 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 BBS7Q8IWZ6 715 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 C12orf56Q8IXR9 622 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 TMEFF1Q8IYR6 380 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 ZNF513Q8N8E2 541 aaPredicted RBP16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 OTUB2Q96DC9 234 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 NUSAP1Q9BXS6 441 aaKnown RBP16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 GZF1Q9H116 711 aaPredicted RBP16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 FAM49BQ9NUQ9 324 aa16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 CHORDC1Q9UHD1 332 aaPredicted RBP16.76■□□□□ 0.27
CHMP4A-204ENST00000530996 ATG2BQ96BY7 2078 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms