RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 FAM153AQ9UHL3 310 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 GGA2Q9UJY4 613 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 TRIM33Q9UPN9 1127 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 Q9Y3F1 56 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 NFS1Q9Y697 457 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 UMODL1Q5DID0 1318 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 NRCAMQ92823 1304 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 ATXN2Q99700 1313 aaKnown RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 A0A1B0GUA9 196 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 SMIM35A0A1B0GVV1 85 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 TCRBV5S1A1TA0A578 114 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 SIGLEC16A6NMB1 481 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 ZNF487B1APH4 448 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 BTBD19C9JJ37 291 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 EIF3HO15372 352 aaKnown RBP eCLIP5.86□□□□□ -1.47
PCF11-205ENST00000530906 TLR3O15455 904 aaKnown RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 XPOTO43592 962 aaKnown RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 SORBS3O60504 671 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 ZNF189O75820 626 aaPredicted RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 TJP3O95049 919 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 ERBB2P04626 1255 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 EDN1P05305 212 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 FAM163BP0C2L3 166 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 STAG3L1P0CL83 205 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 VDRP11473 427 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 HARSP12081 509 aaKnown RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 ATF7P17544 494 aaPredicted RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 SCNN1AP37088 669 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 TNFSF9P41273 254 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 GABRB2P47870 512 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 MARCKSL1P49006 195 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 CLCN3P51790 818 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 PMS2P54278 862 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 ZNF844Q08AG5 666 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 IFFO1Q0D2I5 559 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 KLF1Q13351 362 aaPredicted RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 ZNF211Q13398 564 aaPredicted RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 TMEM132DQ14C87 1099 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 PPP1R7Q15435 360 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 CNGA2Q16280 664 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 OCLNQ16625 522 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 EAPPQ56P03 285 aaPredicted RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 ODF2Q5BJF6 829 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 TTMPQ5BVD1 217 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 ZBTB41Q5SVQ8 909 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 CEP85LQ5SZL2 805 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 LMBRD2Q68DH5 695 aaPredicted RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 SPOPLQ6IQ16 392 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 DCUN1D2Q6PH85 259 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 MTHFD1LQ6UB35 978 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 MMS22LQ6ZRQ5 1243 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 ZNF365Q70YC5 407 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 B4GALNT4Q76KP1 1039 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 GPR142Q7Z601 462 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 DPP9Q86TI2 863 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 ERICH1Q86X53 443 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 DNAAF5Q86Y56 855 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 THNSL1Q8IYQ7 743 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 LRRC71Q8N4P6 559 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 LRRC52Q8N7C0 313 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 UBLCP1Q8WVY7 318 aaPredicted RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 CENPTQ96BT3 561 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 C18orf8Q96DM3 657 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 MAML3Q96JK9 1138 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 GDAP1L1Q96MZ0 367 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 ACAP3Q96P50 834 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 TINF2Q9BSI4 451 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 C16orf70Q9BSU1 422 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 KATNAL1Q9BW62 490 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 TRAIPQ9BWF2 469 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 GCOM2Q9BZD3 368 aaPredicted RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 OSBPL8Q9BZF1 889 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 DCLK3Q9C098 648 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 SAP130Q9H0E3 1048 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 PDZD7Q9H5P4 517 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 ERVK-5Q9HDB9 667 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 GRHL1Q9NZI5 618 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 PRDM4Q9UKN5 801 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 AKT3Q9Y243 479 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 DRG1Q9Y295 367 aaKnown RBP5.86□□□□□ -1.47
PCF11-205ENST00000530906 CITO14578 2027 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 KAT6AQ92794 2004 aa5.86□□□□□ -1.47
PCF11-205ENST00000530906 MBLAC1A4D2B0 266 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 MANSC4A6NHS7 340 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 TM4SF5O14894 197 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 TSPAN1O60635 241 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 KPNA6O60684 536 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 CILPO75339 1184 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 TCEA3O75764 348 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 TOMM70O94826 608 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 SNAI1O95863 264 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 F2P00734 622 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 AGTP01019 485 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 CST3P01034 146 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 CD4P01730 458 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 KRT14P02533 472 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 MMP3P08254 477 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 ABHD2P08910 425 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 CXCL8P10145 99 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 CYP2C8P10632 490 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms