RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 OTOP3Q7RTS5 596 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 CCDC186Q7Z3E2 898 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 TMC6Q7Z403 805 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 ADHFE1Q8IWW8 467 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 OVCA2Q8WZ82 227 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 SYN2Q92777 582 aaPredicted RBP22.46■■□□□ 1.19
CAPN1-220ENST00000530567 RPGRIP1Q96KN7 1286 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 ZSWIM3Q96MP5 696 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 SLITRK1Q96PX8 696 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 GCNAQ96QF7 691 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 ULBP1Q9BZM6 244 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 LRRC4Q9HBW1 653 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 TJP2Q9UDY2 1190 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 PRKAG3Q9UGI9 489 aa22.46■■□□□ 1.19
CAPN1-220ENST00000530567 LOC730098B7Z3J9 87 aa22.45■■□□□ 1.18
CAPN1-220ENST00000530567 GBP2P32456 591 aaPredicted RBP22.45■■□□□ 1.18
CAPN1-220ENST00000530567 NOMO3P69849 1222 aa22.45■■□□□ 1.18
CAPN1-220ENST00000530567 ARID5BQ14865 1188 aa22.45■■□□□ 1.18
CAPN1-220ENST00000530567 PM20D1Q6GTS8 502 aa22.45■■□□□ 1.18
CAPN1-220ENST00000530567 TDRD5Q8NAT2 981 aaKnown RBP22.45■■□□□ 1.18
CAPN1-220ENST00000530567 CPXM1Q96SM3 734 aa22.45■■□□□ 1.18
CAPN1-220ENST00000530567 PCDHB18PQ96TA0 734 aa22.45■■□□□ 1.18
CAPN1-220ENST00000530567 NUCKS1Q9H1E3 243 aaKnown RBP22.45■■□□□ 1.18
CAPN1-220ENST00000530567 GDE1Q9NZC3 331 aa22.45■■□□□ 1.18
CAPN1-220ENST00000530567 EPS15L1Q9UBC2 864 aa22.45■■□□□ 1.18
CAPN1-220ENST00000530567 CHORDC1Q9UHD1 332 aaPredicted RBP22.45■■□□□ 1.18
CAPN1-220ENST00000530567 PIK3R2O00459 728 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 LSM8O95777 96 aaKnown RBP22.44■■□□□ 1.18
CAPN1-220ENST00000530567 CYP1A1P04798 512 aaPredicted RBP22.44■■□□□ 1.18
CAPN1-220ENST00000530567 USP17L7P0C7H9 530 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 CCDC172P0C7W6 258 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 LAMP2P13473 410 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 PTPN20Q4JDL3 420 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 TJAP1Q5JTD0 557 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 GPR158Q5T848 1215 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 SNX30Q5VWJ9 437 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 HGSNATQ68CP4 663 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 TXNDC8Q6A555 127 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 SCD5Q86SK9 330 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 TMEM110Q86TL2 294 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 PDZD8Q8NEN9 1154 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 ZNF397Q8NF99 534 aaPredicted RBP22.44■■□□□ 1.18
CAPN1-220ENST00000530567 NDRG1Q92597 394 aaKnown RBP22.44■■□□□ 1.18
CAPN1-220ENST00000530567 MRPS31Q92665 395 aaKnown RBP22.44■■□□□ 1.18
CAPN1-220ENST00000530567 MCRS1Q96EZ8 462 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 AGPAT1Q99943 283 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 NMUR1Q9HB89 426 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 CYLDQ9NQC7 956 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 OSER1Q9NX31 292 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 TRPM5Q9NZQ8 1165 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 NR2E1Q9Y466 385 aa22.44■■□□□ 1.18
CAPN1-220ENST00000530567 C2orf78A6NCI8 922 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 C19orf67A6NJJ6 358 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 E5RJQ4 531 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 ZBED1O96006 694 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 LCP1P13796 627 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 HNRNPH3P31942 346 aaKnown RBP22.43■■□□□ 1.18
CAPN1-220ENST00000530567 PPP3CCP48454 512 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 GOLGA8FQ08AF8 430 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 GOLGA8DPQ0D2H9 430 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 SCML4Q8N228 414 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 TMEM35BQ8NCS4 154 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 DNAJC7Q99615 494 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 SLC46A2Q9BY10 475 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 PDCL3Q9H2J4 239 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 HAUS4Q9H6D7 363 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 TASP1Q9H6P5 420 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 CNGB3Q9NQW8 809 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 ST7Q9NRC1 585 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 CEP83Q9Y592 693 aa22.43■■□□□ 1.18
CAPN1-220ENST00000530567 ZFP37Q9Y6Q3 630 aaPredicted RBP22.43■■□□□ 1.18
CAPN1-220ENST00000530567 MFAP3LO75121 409 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 ADCY5O95622 1261 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 SKILP12757 684 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 ACADSBP45954 432 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 DAOAP59103 153 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 ARHGAP15Q53QZ3 475 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 NAA35Q5VZE5 725 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 TRIM72Q6ZMU5 477 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 ZNF571Q7Z3V5 609 aaPredicted RBP22.42■■□□□ 1.18
CAPN1-220ENST00000530567 MON1AQ86VX9 555 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 ZDHHC14Q8IZN3 488 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 SIX6OS1Q8N1H7 587 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 CLEC4CQ8WTT0 213 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 ACSF2Q96CM8 615 aaPredicted RBP22.42■■□□□ 1.18
CAPN1-220ENST00000530567 SLC22A12Q96S37 553 aa22.42■■□□□ 1.18
CAPN1-220ENST00000530567 NUP210Q8TEM1 1887 aaPredicted RBP22.42■■□□□ 1.18
CAPN1-220ENST00000530567 A0A1W2PQH9 124 aa22.41■■□□□ 1.18
CAPN1-220ENST00000530567 FAM170AA1A519 330 aa22.41■■□□□ 1.18
CAPN1-220ENST00000530567 PAPSS1O43252 624 aaPredicted RBP22.41■■□□□ 1.18
CAPN1-220ENST00000530567 OLFM2O95897 454 aa22.41■■□□□ 1.18
CAPN1-220ENST00000530567 OAS1P00973 400 aaKnown RBP22.41■■□□□ 1.18
CAPN1-220ENST00000530567 ERBB2P04626 1255 aa22.41■■□□□ 1.18
CAPN1-220ENST00000530567 UNGP13051 313 aaPredicted RBP22.41■■□□□ 1.18
CAPN1-220ENST00000530567 DDX6P26196 483 aaKnown RBP eCLIP22.41■■□□□ 1.18
CAPN1-220ENST00000530567 KLHL30Q0D2K2 578 aa22.41■■□□□ 1.18
CAPN1-220ENST00000530567 FAM78AQ5JUQ0 283 aa22.41■■□□□ 1.18
CAPN1-220ENST00000530567 MAB21L3Q8N8X9 362 aa22.41■■□□□ 1.18
CAPN1-220ENST00000530567 PPP1R13BQ96KQ4 1090 aa22.41■■□□□ 1.18
CAPN1-220ENST00000530567 ASB16Q96NS5 453 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms