RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 TNNC1P63316 161 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 AMPD3Q01432 767 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 CYP24A1Q07973 514 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 ZNF252P-AS1Q0IIN9 211 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 LMAN2Q12907 356 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 BYSLQ13895 437 aaKnown RBP15.87■□□□□ 0.13
CAPN1-219ENST00000530495 SNX30Q5VWJ9 437 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 UNQ6494/PRO21346Q6UXR6 183 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 TMEFF1Q8IYR6 380 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 PHTF2Q8N3S3 785 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 FRMD1Q8N878 549 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 B3GALNT2Q8NCR0 500 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 PDZD8Q8NEN9 1154 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 KCNV2Q8TDN2 545 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 CCDC127Q96BQ5 260 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 CGRRF1Q99675 332 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 CUEDC2Q9H467 287 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 ZSCAN16Q9H4T2 348 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-219ENST00000530495 ARHGEF4Q9NR80 690 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 TMEM74BQ9NUR3 256 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 MBD1Q9UIS9 605 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-219ENST00000530495 MTMR6Q9Y217 621 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 CEP192Q8TEP8 1941 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 A8MXQ7 604 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 COCHO43405 550 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 ATICP31939 592 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 MYL6P60660 151 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 GAD2Q05329 585 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 FOXC1Q12948 553 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 MAP7D1Q3KQU3 841 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 TRIM61Q5EBN2 209 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 LY6G5CQ5SRR4 150 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 SYT12Q8IV01 421 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 KDF1Q8NAX2 398 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-219ENST00000530495 XXYLT1Q8NBI6 393 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 LINC00301Q8NCQ3 95 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 ZFRQ96KR1 1074 aaKnown RBP15.86■□□□□ 0.13
CAPN1-219ENST00000530495 SPACA7Q96KW9 195 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 KCNK16Q96T55 309 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 DUSP9Q99956 384 aaKnown RBP15.86■□□□□ 0.13
CAPN1-219ENST00000530495 NUSAP1Q9BXS6 441 aaKnown RBP15.86■□□□□ 0.13
CAPN1-219ENST00000530495 GZF1Q9H116 711 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-219ENST00000530495 XYLT2Q9H1B5 865 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 IL37Q9NZH6 218 aa15.86■□□□□ 0.13
CAPN1-219ENST00000530495 NXF1Q9UBU9 619 aaKnown RBP15.86■□□□□ 0.13
CAPN1-219ENST00000530495 CHORDC1Q9UHD1 332 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-219ENST00000530495 CEP295Q9C0D2 2601 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 MYO18AQ92614 2054 aaKnown RBP15.85■□□□□ 0.13
CAPN1-219ENST00000530495 ZFHX4Q86UP3 3567 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 CLIC2O15247 247 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 DPP6P42658 865 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 PTGER3P43115 390 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 ASIC1P78348 528 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 EHHADHQ08426 723 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 IFRD2Q12894 506 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-219ENST00000530495 TRPC3Q13507 836 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 UAP1L1Q3KQV9 507 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 FAM26FQ5R3K3 315 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 HECTD3Q5T447 861 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 SLC23A3Q6PIS1 610 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 ETFBKMTQ8IXQ9 262 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 SCFD1Q8WVM8 642 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 FBXO32Q969P5 355 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 SYAP1Q96A49 352 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-219ENST00000530495 INTS4Q96HW7 963 aaKnown RBP15.85■□□□□ 0.13
CAPN1-219ENST00000530495 C7orf25Q9BPX7 421 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 TMEM121BQ9BXQ6 578 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-219ENST00000530495 BCCIPQ9P287 314 aaKnown RBP eCLIP15.85■□□□□ 0.13
CAPN1-219ENST00000530495 ZMIZ1Q9ULJ6 1067 aa15.85■□□□□ 0.13
CAPN1-219ENST00000530495 TBC1D3BA6NDS4 549 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 SPTLC2O15270 562 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 HOXC11O43248 304 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-219ENST00000530495 PPP6R2O75170 966 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 ZDHHC11BP0C7U3 371 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 PI4KAP42356 2102 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 TUBP50607 506 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 CYP2J2P51589 502 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 KDSRQ06136 332 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 STK38Q15208 465 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 PREPLQ4J6C6 727 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-219ENST00000530495 PEAR1Q5VY43 1037 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-219ENST00000530495 BTBD8Q5XKL5 378 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 PAQR9Q6ZVX9 377 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 C12orf56Q8IXR9 622 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 IQUBQ8NA54 791 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 SCAMP5Q8TAC9 235 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 HMGB4Q8WW32 186 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 DHX58Q96C10 678 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 VRTNQ9H8Y1 702 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 ZDHHC4Q9NPG8 344 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 COMMD8Q9NX08 183 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 CGNQ9P2M7 1197 aaKnown RBP15.84■□□□□ 0.13
CAPN1-219ENST00000530495 PILRBQ9UKJ0 227 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 CIZ1Q9ULV3 898 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-219ENST00000530495 UBE4BO95155 1302 aa15.84■□□□□ 0.13
CAPN1-219ENST00000530495 ASCC3Q8N3C0 2202 aaKnown RBP15.83■□□□□ 0.13
CAPN1-219ENST00000530495 TCRBV21S2A2A0A5A6 115 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 FAM92AA1XBS5 289 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 TULP3O75386 442 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 TOP3BO95985 862 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms