RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 KRT83P78385 493 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 IFI35P80217 286 aaPredicted RBP3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 SRSF3P84103 164 aaKnown RBP3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 SATB1Q01826 763 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 KRT17Q04695 432 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 CAMK1Q14012 370 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 WTAPQ15007 396 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 PLCB4Q15147 1175 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 SEC23BQ15437 767 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 TBCEQ15813 527 aaPredicted RBP3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 ZNF484Q5JVG2 852 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 SLC30A6Q6NXT4 461 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 INO80CQ6PI98 192 aaPredicted RBP3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 CPLX4Q7Z7G2 160 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 TRABD2AQ86V40 505 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 AGBL5Q8NDL9 886 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 FLAD1Q8NFF5 587 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 TBC1D15Q8TC07 691 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 HMGB4Q8WW32 186 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 USP6NLQ92738 828 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 CUL5Q93034 780 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 ZBTB8AQ96BR9 441 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 BORCS6Q96GS4 357 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 KIRREL1Q96J84 757 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 ZNF668Q96K58 619 aaPredicted RBP3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 ITPAQ9BY32 194 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 SYNCQ9H7C4 482 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 UNKLQ9H9P5 680 aaKnown RBP3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 LIN7CQ9NUP9 197 aaKnown RBP3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 SEPT11Q9NVA2 429 aaKnown RBP3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 NCDNQ9UBB6 729 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 VPS51Q9UID3 782 aa3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 SMG5Q9UPR3 1016 aaKnown RBP3.93□□□□□ -1.78
AMBRA1-208ENST00000529558 BICDL2A1A5D9 508 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 TSPY2A6NKD2 308 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 KIF28PB7ZC32 967 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 POLRMTO00411 1230 aaKnown RBP3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 SEPT4O43236 478 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 TRIM13O60858 407 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 GUCY1B2O75343 617 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 CLEC3BP05452 202 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 ZNF888P0CJ79 500 aaPredicted RBP3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 TSPY3P0CV98 308 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 TSPY8P0CW00 308 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 UBL4AP11441 157 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 ZNF28P17035 718 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 SPINK2P20155 84 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 IL11P20809 199 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 SLC6A2P23975 617 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 OAS2P29728 719 aaKnown RBP3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 ARL3P36405 182 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 RRADP55042 308 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 LILRA4P59901 499 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 ADAM17P78536 824 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 TSPY1Q01534 308 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 CREB5Q02930 508 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 SF3A3Q12874 501 aaKnown RBP eCLIP3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 MYO1EQ12965 1108 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 CDC16Q13042 620 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 MPP3Q13368 585 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 PDCLQ13371 301 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 DCTN1Q14203 1278 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 CSHL1Q14406 222 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 TBR1Q16650 682 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 PTCHD3Q3KNS1 767 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 ZNF792Q3KQV3 632 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 CBWD5Q5RIA9 395 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 HECTD3Q5T447 861 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 ATXN7L2Q5T6C5 722 aaPredicted RBP3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 FAM69AQ5T7M9 428 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 LIPMQ5VYY2 423 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 ZKSCAN2Q63HK3 967 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 RPUSD3Q6P087 351 aaKnown RBP3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 ATF7IPQ6VMQ6 1270 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 FAM43BQ6ZT52 329 aaPredicted RBP3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 PXKQ7Z7A4 578 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 ADGRE4PQ86SQ3 457 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 CREBRFQ8IUR6 639 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 CFAP52Q8N1V2 620 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 LRRC71Q8N4P6 559 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 OR14K1Q8NGZ2 314 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 MBD3L2Q8NHZ7 208 aaPredicted RBP3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 NFKBIDQ8NI38 313 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 SSH3Q8TE77 659 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 RABGGTAQ92696 567 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 WDR24Q96S15 920 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 YME1L1Q96TA2 773 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 MECRQ9BV79 373 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 PHF7Q9BWX1 381 aaPredicted RBP3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 RMI1Q9H9A7 625 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 PLEKHA2Q9HB19 425 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 IL23AQ9NPF7 189 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 DIAPH3Q9NSV4 1193 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 MRGBPQ9NV56 204 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 TMLHEQ9NVH6 421 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 SIRT5Q9NXA8 310 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 TAS2R10Q9NYW0 307 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 CEP72Q9P209 647 aa3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 CNOT7Q9UIV1 285 aaKnown RBP3.92□□□□□ -1.78
AMBRA1-208ENST00000529558 ZNF112Q9UJU3 913 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms