RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 ARHGAP20Q9P2F6 1191 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 GAS2O43903 313 aaKnown RBP8.4□□□□□ -1.06
CTNND1-220ENST00000529526 IMPDH2P12268 514 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 BGNP21810 368 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 RGS2P41220 211 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 HPCAP84074 193 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 MRPL28Q13084 256 aaKnown RBP8.4□□□□□ -1.06
CTNND1-220ENST00000529526 PDK2Q15119 407 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 SLC15A2Q16348 729 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 NBPF12Q5TAG4 269 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-220ENST00000529526 UGT3A1Q6NUS8 523 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 KIAA2013Q8IYS2 634 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 JADE3Q92613 823 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 NOD2Q9HC29 1040 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 SNTG2Q9NY99 539 aa8.4□□□□□ -1.06
CTNND1-220ENST00000529526 EVPLLA8MZ36 301 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 S100A5P33763 92 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 RFX3P48380 749 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 MRPS15P82914 257 aaKnown RBP8.4□□□□□ -1.07
CTNND1-220ENST00000529526 SREBF2Q12772 1141 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 CENPPQ6IPU0 288 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 SDE2Q6IQ49 451 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 LRRC8BQ6P9F7 803 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 TEX9Q8N6V9 391 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 KIAA0895Q8NCT3 520 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 CYP2W1Q8TAV3 490 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 RIN3Q8TB24 985 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 OSMRQ99650 979 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 PIF1Q9H611 641 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 CAAP1Q9H8G2 361 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 ZC4H2Q9NQZ6 224 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 C6orf203Q9P0P8 240 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-220ENST00000529526 DNAJC16Q9Y2G8 782 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 AAR2Q9Y312 384 aaKnown RBP8.4□□□□□ -1.07
CTNND1-220ENST00000529526 SLC16A1P53985 500 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 NCALDP61601 193 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 PGM5Q15124 567 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 MAPRE1Q15691 268 aaKnown RBP8.4□□□□□ -1.07
CTNND1-220ENST00000529526 AASDHQ4L235 1098 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-220ENST00000529526 CTXN3Q4LDR2 81 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 WDR49Q8IV35 697 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 SLC44A2Q8IWA5 706 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-220ENST00000529526 CERKQ8TCT0 537 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 RXFP2Q8WXD0 754 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 GLT1D1Q96MS3 346 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 FAM129AQ9BZQ8 928 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 DLGAP2Q9P1A6 1054 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 CPA4Q9UI42 421 aa8.4□□□□□ -1.07
CTNND1-220ENST00000529526 CNTNAP2Q9UHC6 1331 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 TTLL13PA6NNM8 815 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 DEAF1O75398 565 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 GARTP22102 1010 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 BCAT1P54687 386 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 TBL3Q12788 808 aaKnown RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 CDC16Q13042 620 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 MTFR1Q15390 333 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 HIST2H2ACQ16777 129 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 HIST2H2AA3Q6FI13 130 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 TNIP2Q8NFZ5 429 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 DIS3LQ8TF46 1054 aaKnown RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 AKT1S1Q96B36 256 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 PHF21AQ96BD5 680 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 TMEM120AQ9BXJ8 343 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 FUT8Q9BYC5 575 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 NT5MQ9NPB1 228 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 ENTPD7Q9NQZ7 604 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 EIF3LQ9Y262 564 aaKnown RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 SLC12A8A0AV02 714 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 E9PBE3 544 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 KLHL41O60662 606 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 SLC2A3P11169 496 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 AKAP5P24588 427 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 CYP2F1P24903 491 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 CHI3L1P36222 383 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 AQP5P55064 265 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 OXCT1P55809 520 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 ALDH6A1Q02252 535 aaKnown RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 DSG1Q02413 1049 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 POLD3Q15054 466 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 CCDC142Q17RM4 750 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 MRNIPQ6NTE8 343 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 ARMC6Q6NXE6 501 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 PTAR1Q7Z6K3 402 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 LRRC6Q86X45 466 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 KIRREL3Q8IZU9 778 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 HNRNPLLQ8WVV9 542 aaKnown RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 PPP2R3CQ969Q6 453 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 CELF6Q96J87 481 aaKnown RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 ZNF333Q96JL9 665 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 RBBP8Q99708 897 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 IL17RBQ9NRM6 502 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 GIMAP4Q9NUV9 329 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 SETD4Q9NVD3 440 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 USE1Q9NZ43 259 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 TCRBV5S4A2TA0A5A2 114 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 MLNP12872 115 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 FGFR2P21802 821 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 SKOR1P84550 965 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 CSHL1Q14406 222 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 MOXD1Q6UVY6 613 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms