RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 DR1Q01658 176 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 RNASELQ05823 741 aaKnown RBP8.08□□□□□ -1.12
SOX6-211ENST00000528429 BST2Q10589 180 aaKnown RBP8.08□□□□□ -1.12
SOX6-211ENST00000528429 CLUL1Q15846 466 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 PDCD2Q16342 344 aaPredicted RBP8.08□□□□□ -1.12
SOX6-211ENST00000528429 UPP1Q16831 310 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 TIGD5Q53EQ6 642 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 TRAF7Q6Q0C0 670 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 SLC24A5Q71RS6 500 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 SND1Q7KZF4 910 aaKnown RBP eCLIP8.08□□□□□ -1.12
SOX6-211ENST00000528429 MAATS1Q7Z4T9 603 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 RTN4RL1Q86UN2 441 aaPredicted RBP8.08□□□□□ -1.12
SOX6-211ENST00000528429 RBM12BQ8IXT5 1001 aaKnown RBP8.08□□□□□ -1.12
SOX6-211ENST00000528429 CCDC105Q8IYK2 499 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 CRYBG2Q8N1P7 616 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 CHCHD4Q8N4Q1 142 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 DBF4BQ8NFT6 615 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 CLEC4CQ8WTT0 213 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 SLC35F5Q8WV83 523 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 HNRNPLLQ8WVV9 542 aaKnown RBP8.08□□□□□ -1.12
SOX6-211ENST00000528429 CASKIN2Q8WXE0 1202 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 MCRS1Q96EZ8 462 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 HERPUD2Q9BSE4 406 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 FUT8Q9BYC5 575 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 SLITRK6Q9H5Y7 841 aa8.08□□□□□ -1.12
SOX6-211ENST00000528429 LAMA2P24043 3122 aaKnown RBP8.08□□□□□ -1.12
SOX6-211ENST00000528429 RNF8O76064 485 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 ITGB1P05556 798 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 KRT10P13645 584 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 PDGFRAP16234 1089 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 PTPN1P18031 435 aaKnown RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 WARSP23381 471 aaKnown RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 MAN1A1P33908 653 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 RABGGTBP53611 331 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 WASHC5Q12768 1159 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 GRIK3Q13003 919 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 TUSC3Q13454 348 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 BFSP2Q13515 415 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 C15orf59Q2T9L4 293 aaPredicted RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 PKDCCQ504Y2 493 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 SH3PXD2AQ5TCZ1 1133 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 ARHGAP17Q68EM7 881 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 ALKBH2Q6NS38 261 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 ANKRD52Q8NB46 1076 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 GABPB2Q8TAK5 448 aaPredicted RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 LINC01599Q8WXQ3 324 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 PPP1R12CQ9BZL4 782 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 NGRNQ9NPE2 291 aaKnown RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 EME2A4GXA9 379 aaPredicted RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 C9IYK1 514 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 PAPSS1O43252 624 aaPredicted RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 DAPK3O43293 454 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 PHF2O75151 1096 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 LRCH4O75427 683 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 HSPA6P17066 643 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 RPL9P32969 192 aaKnown RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 CETN2P41208 172 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 GABRB2P47870 512 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 CCL23P55773 120 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 SLC8A3P57103 927 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 CASP8Q14790 479 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 COL19A1Q14993 1142 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 RAB6CQ53S08 254 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 SCYL2Q6P3W7 929 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 CCDC137Q6PK04 289 aaKnown RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 HDXQ7Z353 690 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 ZNF280BQ86YH2 543 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 FAM126BQ8IXS8 530 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 KATNAL2Q8IYT4 538 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 FUKQ8N0W3 1084 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 RXFP2Q8WXD0 754 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 HSPH1Q92598 858 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 FAM149B1Q96BN6 582 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 HAUS1Q96CS2 278 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 SCLYQ96I15 445 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 MPP4Q96JB8 637 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 CFAP57Q96MR6 1250 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 SYT15Q9BQS2 421 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 OSBPL8Q9BZF1 889 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 PHACTR1Q9C0D0 580 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 RAB6CQ9H0N0 254 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 PAK6Q9NQU5 681 aaPredicted RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 RGS18Q9NS28 235 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 KRT82Q9NSB4 513 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 PRG3Q9Y2Y8 225 aaPredicted RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 UTP11Q9Y3A2 253 aaKnown RBP8.07□□□□□ -1.12
SOX6-211ENST00000528429 SQORQ9Y6N5 450 aa8.07□□□□□ -1.12
SOX6-211ENST00000528429 MYBPHLA2RUH7 354 aa8.06□□□□□ -1.12
SOX6-211ENST00000528429 HOXA2O43364 376 aa8.06□□□□□ -1.12
SOX6-211ENST00000528429 NBNO60934 754 aa8.06□□□□□ -1.12
SOX6-211ENST00000528429 ODC1P11926 461 aa8.06□□□□□ -1.12
SOX6-211ENST00000528429 GPD1P21695 349 aa8.06□□□□□ -1.12
SOX6-211ENST00000528429 IL1R2P27930 398 aa8.06□□□□□ -1.12
SOX6-211ENST00000528429 CLK1P49759 484 aaKnown RBP8.06□□□□□ -1.12
SOX6-211ENST00000528429 BCAR1P56945 870 aa8.06□□□□□ -1.12
SOX6-211ENST00000528429 DYNLT1P63172 113 aa8.06□□□□□ -1.12
SOX6-211ENST00000528429 SKIV2LQ15477 1246 aaKnown RBP8.06□□□□□ -1.12
SOX6-211ENST00000528429 HADHQ16836 314 aaKnown RBP8.06□□□□□ -1.12
SOX6-211ENST00000528429 CLLU1OSQ5K130 101 aa8.06□□□□□ -1.12
SOX6-211ENST00000528429 KIAA0319Q5VV43 1072 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms